13 homologs were found in PanDaTox collection
for query gene Rru_A3080 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A3080  hypothetical protein  100 
 
 
398 aa  731    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0380  glycosyl transferase family protein  29.35 
 
 
570 aa  88.6  2e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.744875 
 
 
-
 
NC_007802  Jann_1482  glycosyl transferase family protein  28.45 
 
 
547 aa  60.8  0.00000004  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1888  glycosyl transferase family 39  27.07 
 
 
552 aa  56.2  0.000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.0174434 
 
 
-
 
NC_009720  Xaut_4551  glycosyl transferase family protein  25.95 
 
 
577 aa  48.5  0.0002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4522  glycosyl transferase family protein  26.5 
 
 
568 aa  48.5  0.0002  Caulobacter sp. K31  Bacteria  normal  0.185613  normal  0.129654 
 
 
-
 
NC_007925  RPC_2544  glycosyl transferase family protein  26.9 
 
 
581 aa  47.8  0.0003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.327974  normal  0.26724 
 
 
-
 
NC_007406  Nwi_1533  glycosyl transferase family protein  26.37 
 
 
584 aa  47  0.0005  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.030992  normal  0.239823 
 
 
-
 
NC_007964  Nham_2076  glycosyl transferase family protein  24.43 
 
 
580 aa  43.9  0.005  Nitrobacter hamburgensis X14  Bacteria  normal  0.654023  n/a   
 
 
-
 
NC_008347  Mmar10_0012  glycosyl transferase family protein  26.2 
 
 
557 aa  43.5  0.006  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2917  glycosyl transferase family protein  25.08 
 
 
580 aa  43.1  0.007  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2389  glycosyl transferase family protein  28.06 
 
 
637 aa  43.5  0.007  Maricaulis maris MCS10  Bacteria  normal  normal  0.476236 
 
 
-
 
NC_010725  Mpop_4686  glycosyl transferase family 39  29.44 
 
 
598 aa  43.1  0.008  Methylobacterium populi BJ001  Bacteria  normal  normal  0.938839 
 
 
-
 
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