| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2544 |
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| Symbol | |
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| ID | 3970973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2758077 |
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| End bp | 2759822 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925652 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_532413 |
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| Protein GI | 90424043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.327974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.26724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CCTTTGCAAG ACCCCGATTT GGCATGCCGC CGGAGCCGAA GAACCGGATC
AATCCGGGCC AGCGGCTGGT CGGCGTGATC GATTACGTCG CCGCCAGCCA TGGCCGCGCG
GTGGCCTTTC TGGCGCTGTG CGGGTTGTTG TTCACGCTGT CGGGATTTTT CACGATTCCG
CCGATCGACC GCGACGAAGC GCGCTTCGCA CAGGCCACCA AGCAGATGGT CGAGACCAGC
GATTTCGTCG ATATCCGGTT TCAGGGCGAG GTTCGCTATA AGAAGCCGGT CGGGATCTAT
TGGCTGCAGG CGACCGTGGT CGAAGCCGCC TCGGCGCTCG GCCTGCCGCG CGCCGAGGTG
CGGATCTGGC TGTACCGGGT GCCCTCGATG CTGGGCGCGA TCGGCGCGGT GTTGCTGACC
TATTGGACCG CCTTGGCGTT CGTGACGCGG CGCGGCGCGG TGCTCGCCGG CTTGATCCTT
TGCAGTTCGA TTTTGCTCGG CGTCGAAGCC CGGCTCGCCA AGACCGACGC GGTGCTGCTG
TTGACCGTGA TCGCCGCGAT GGGGGCGATG GCGCGGGTCT ATCTCGCCTG GCAGCGCGGC
GAGGATTCCG CGCGCGGCTC GTGGACCACG CCGGCGATCT TCTGGACCGC GCTGGCCGGC
GGCATCCTGC TGAAGGGGCC GCTGATCCTG ATGTTCGTCG GCCTCACCAT CGTCACCCTG
GCGATCTGCG ACCGCTCGCT GGCCTGGCTG CGGCGGCTGC GGCCGTTGTG GGGCGCGCTG
TGGATGCTGG CATTGGTGCT GCCGTGGTTC ATCGCCATCT TCCAGCGCGC CGGCGAGAGC
TTCTTTTCCG ACTCGGTCGG CGGCGACATG CTGAGCAAGA TCACCAGCGC CAAGGAATCC
CACGGCGCGC CGCCCGGAGT GTATTTCCTG CTGTTCTGGG TGACGTTCTG GCCCGGCGCG
CCGCTCGCCG CGATGGCGGC GCCGGCGGTG TGGCGGGCGC GGCGCGAGCC CGGCGCGCAA
TATCTGTTGG CTTGGCTGGT GCCGTCCTGG ATCGTGTTCG AACTGGTGAT GACCAAGCTG
CCGCATTACG TGCTGCCGCT GTATCCGGCG ATCGCCATCC TGCTGGTCGG GGCATTGGAG
CGGCGCGTGC TGTCGCGCGG CTGGCTGACC CGTGGGGCGG CGTGGTGGTT CGCGATTCCC
GCCGCGGTGC TGACCATCGC GGTGGTCGGC GCGGTGTGGC TGACACGGCA GCCGGCGTTC
CTGGCCTGGC CGTTCGTCGC GGTGTCGATG ATCTTCGGGC TGTTGGCCTG GCGGCTCTAT
GACGACATCC GCTCCGAGCA CGCCATGCTC AACGCGGTGG CGTCGTCGCT GTTTCTCAGC
GTTGCCGTGT ACGGCATCGT GGTGCCGTCG CTGACGCCGC TGTTTCCCAG CGTCGAGATC
GCCCGTGCGC TGCGCAACGT GGTCTGCGTC GGCCCGAAGG CGGCGGCGGC GGGCTATCAG
GAGCCCAGCC TGGTGTTCAT GACCGGGACC TCGACGCTGC TCACCGACGG CTCCGGCGCC
GCGGATTTCT TAGGCCAAGG CAGTTGCCGC TTCGCGCTGG TGGAATCCCG TACCGAACGG
GCGTTCGCGG CGCGCGCCGA AGCCATCGGC CTGCGCTACG ACGTCGCCGC ACGGATCGAC
GGCTATAATT TCTCGCAGGG CCGGGCGATC TCGGTGGCGG TGTTCCGCTC CGAGGGCACC
CAGTAA
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| Protein sequence | MSETFARPRF GMPPEPKNRI NPGQRLVGVI DYVAASHGRA VAFLALCGLL FTLSGFFTIP
PIDRDEARFA QATKQMVETS DFVDIRFQGE VRYKKPVGIY WLQATVVEAA SALGLPRAEV
RIWLYRVPSM LGAIGAVLLT YWTALAFVTR RGAVLAGLIL CSSILLGVEA RLAKTDAVLL
LTVIAAMGAM ARVYLAWQRG EDSARGSWTT PAIFWTALAG GILLKGPLIL MFVGLTIVTL
AICDRSLAWL RRLRPLWGAL WMLALVLPWF IAIFQRAGES FFSDSVGGDM LSKITSAKES
HGAPPGVYFL LFWVTFWPGA PLAAMAAPAV WRARREPGAQ YLLAWLVPSW IVFELVMTKL
PHYVLPLYPA IAILLVGALE RRVLSRGWLT RGAAWWFAIP AAVLTIAVVG AVWLTRQPAF
LAWPFVAVSM IFGLLAWRLY DDIRSEHAML NAVASSLFLS VAVYGIVVPS LTPLFPSVEI
ARALRNVVCV GPKAAAAGYQ EPSLVFMTGT STLLTDGSGA ADFLGQGSCR FALVESRTER
AFAARAEAIG LRYDVAARID GYNFSQGRAI SVAVFRSEGT Q
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