| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2917 |
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| Symbol | |
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| ID | 3910713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 3324846 |
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| End bp | 3326588 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637884820 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_486530 |
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| Protein GI | 86750034 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGA CCTCTGCAAC ACGCCGCTTT GGCGCCCCCC GCGAGCCGAA ATCCGCCATC
GACCCCGGCC GCGGGCTGGT GGCCGTGCTG GATTTCGTGT CCGTCAGCCA CTTTCGCGCC
GTGATCTTTC TCGCTCTGGT CGGGCTGGTG TTCTTCCTGC CGGGCTTCTT CAACATCCCG
CCGATCGACC GCGACGAGGC CCGCTTCGCG CAGGCCACCA AGCAGATGGT CGAGACCGGC
GATTTCGTCG ACATCCGTTT CCAGGACGAG GTCCGCTACA AGAAGCCGGT CGGGATCTAC
TGGCTGCAGG CCGCGGTGGT CGAGACCGCG TCGAAACTCG GCCTACCGCG CGCCCAGGTC
CGGATCTGGC TGTACCGCGT GCCGTCGATG GCGGGTGCGA TCGGCGCCGT GCTGATGACC
TATTGGGCGG CGCTGGCCTT CATCGGCCGG CGCGGCGCCG TCGTCGCCGG GCTGCTGTTG
TGCAGTTCGA TCCTGCTCGG GGTCGAGGCG CGGCTGGCCA AGACCGACGC CTTCCTGCTG
TTCACCGTCA CCGCCGCATT GGGCGCGATG GCGCACGTCT ATCTCGCCTG GCAGCGCGGC
GACGATCGCA CCAATTCATG GGCGACGCCG GCGGTGTTCT GGACCGCGCT CGCCGCGGGC
ATCCTGCTCA AGGGCCCGCT GATCCTGATG TTCATCGCGC TGACGGTGAT CCCGCTGGCG
ATCATGGATC GTTCGGTGGC TTGGCTGTGG CGGCTGAAGC CGCTCGCAGG CATCCCGTGG
ATGCTGCTGC TGGTGCTGCC CTGGTTCATC GCGATCTTCC TGCGCGCCGG CGATACGTTC
TTCACCGATT CGGTCGGCGG TGACATGCTG AGCAAGATCG CCAGCCCGAA GGAATCTCAC
GGCGCGCCGC CGGGCCTGTA TTTCCTGCTG TTCTGGGTGA CGTTCTGGCC CGGCGCGCCG
CTCGCCGCGA TGGCGGCGCC GGCGATCTGG CGGGCCCGGC GCGAGCCCGG CGCGCAATTT
CTGCTGGCGT GGCTGATCCC GTCCTGGGTC GTGTTCGAGA TCGTGATCAC CAAGCTGCCG
CACTACGTGC TGCCGCTGTA TCCGGCGATC GCGATCATGA CCGCGGGCGC GATCGAGCGC
AGCGTGCTGT CGCGCTCGTG GCTGACCCGC GGCGCGGCGT GGTGGTTCGG AATCCCTGTG
GTGGTGCTGT CGCTGGCGAT CGTCGGTGCG ATGGTCCTGA CCCGGCAGCC GGCGTTTCTG
GCCTGGCCGT TCGTGGCGGC GTCGCTGATC TTCGGGCTGT TCGCCTGGCG GCTGTTCGAC
GAGAATCGCG CCGAGGCTTC GCTGCTCAAC GCCTCGCTGG CGTCGCTGTT TCTGATCACC
GCGACGCTCG GCGTGGTGGT GCCGACGCTG CGGCCGGTGT TCCCGAGTGT CGAGATCGCG
CAGGCGCTGC GCAAGGTGGT GTGCGTCGGG CCGAAGGTCG CGGCCGTCGG CTATCACGAG
CCGAGCCTGG TGTTCATGAC CGGCACCGAC ACGCTGCTGA CCGACGGCTC CGGCGCCGCC
GACTTCCTGC TCGGCGGCAG CTGCCGCTTC GCCCTGGTGG AAGCCCGCAG CGAGCGCGTC
TTCGCGCAGC GGGCCGAGGC GATCGGGCTG CGCTACAACG TGGCGACGCG CATCGACGGC
TACAATTTCT CGCAGGGCAA GCCGGTCTCG ATCGCGATCT TCCGCTCCGA AGGCACGCAG
TGA
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| Protein sequence | MIETSATRRF GAPREPKSAI DPGRGLVAVL DFVSVSHFRA VIFLALVGLV FFLPGFFNIP
PIDRDEARFA QATKQMVETG DFVDIRFQDE VRYKKPVGIY WLQAAVVETA SKLGLPRAQV
RIWLYRVPSM AGAIGAVLMT YWAALAFIGR RGAVVAGLLL CSSILLGVEA RLAKTDAFLL
FTVTAALGAM AHVYLAWQRG DDRTNSWATP AVFWTALAAG ILLKGPLILM FIALTVIPLA
IMDRSVAWLW RLKPLAGIPW MLLLVLPWFI AIFLRAGDTF FTDSVGGDML SKIASPKESH
GAPPGLYFLL FWVTFWPGAP LAAMAAPAIW RARREPGAQF LLAWLIPSWV VFEIVITKLP
HYVLPLYPAI AIMTAGAIER SVLSRSWLTR GAAWWFGIPV VVLSLAIVGA MVLTRQPAFL
AWPFVAASLI FGLFAWRLFD ENRAEASLLN ASLASLFLIT ATLGVVVPTL RPVFPSVEIA
QALRKVVCVG PKVAAVGYHE PSLVFMTGTD TLLTDGSGAA DFLLGGSCRF ALVEARSERV
FAQRAEAIGL RYNVATRIDG YNFSQGKPVS IAIFRSEGTQ
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