9 homologs were found in PanDaTox collection
for query gene Rmet_6301 on replicon NC_007972
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007972  Rmet_6301  hypothetical protein  100 
 
 		 235 aa  478  1e-134  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_1526  hypothetical protein  52.99 
 
 		 237 aa  265  4e-70  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012849  Rpic12D_5191  type IV secretory pathway, conjugal transfert protein (putative precursor)  52.99 
 
 		 237 aa  265  4e-70  Ralstonia pickettii 12D  Bacteria  normal  0.100483  normal  1 
 
 
-
 
NC_010087  Bmul_5545  hypothetical protein  48.88 
 
 		 238 aa  234  7e-61  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.0140243 
 
 
-
 
NC_010553  BamMC406_6571  hypothetical protein  48.88 
 
 		 238 aa  232  4.0000000000000004e-60  Burkholderia ambifaria MC40-6  Bacteria  normal  0.625526  normal  1 
 
 
-
 
NC_013930  TK90_2824  Type IV secretory pathway TrbF protein-like protein  27.67 
 
 		 260 aa  57  0.0000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007950  Bpro_5457  Type IV secretory pathway component VirB8-like  27.95 
 
 		 256 aa  53.5  0.000003  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.0195796 
 
 
-
 
NC_007949  Bpro_5235  Type IV secretory pathway component VirB8-like  26.46 
 
 		 243 aa  52.8  0.000005  Polaromonas sp. JS666  Bacteria  normal  0.0587868  normal  1 
 
 
-
 
NC_012855  Rpic12D_4754  hypothetical protein  21.43 
 
 		 232 aa  42.7  0.005  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.26139 
 
 
-
 
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