| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5235 |
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| Symbol | |
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| ID | 4015962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 344538 |
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| End bp | 345269 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637944862 |
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| Product | Type IV secretory pathway component VirB8-like |
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| Protein accession | YP_551994 |
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| Protein GI | 91791043 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0587868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGATTAT TTTCAGGTAA ATCAAAAAAT CAGCCGGCGA GCATCGTGGG TGATGACATC
CGCCGCCTGC CCAATACACC GACTTCCGCC TATGAGGACG GTGCCAACAA ATTCGCTGAG
ATTTACGGGT CAGCCATGGT TAACTCGGGC AGGCTCTTTG CAATTACGGT AGTCGCATTG
TTGCTTGCCA TCACTGCGGT AGGAGCCGTC ATGGTGTTGA CACCTCTCAA AGAGGTCACT
CCTTATGTGA TTGAGGTGAA TTCGGGCTCT GGCCTGGTCA ACAAGCCCAT TGAGGTCCAG
AAGATCACTC CCAACATTGC GGTTGTCAAG GCCGAACTGG CACGTTGGGC AGATGCGGTC
TACACGATTG ACCCACTGCG CACCAATGAC CTGTTCAAGT ACGCAAACGT GCGGTCGCGG
GGTAAAGCAA TTGCCCAGTT CTCCGAGTTC CGGGCACGTG AGCAAGTATT CGCCCGGCTG
CAACGTGAGG CTGGCCTTGT CCGTGAGGTG CAGGTCTCTT CCGTTGATGC CAGCCAGACC
GGAGTGGCAT TCATTTTCCT GAAAACACTT GAACGCACCG GCAACCAAAG TGCAGAGGAC
AGCAAGGTCA AGCGTTACCG CCTGACTCTC CACTATCAAC TTGACTCACC GCGTGAAGAG
GCAGCCCTGC TGGCCAACCC GCTTGGTTTG TATGTGAACT TCTTCAATGA AGCCGAAGAA
AGGGCCAACT GA
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| Protein sequence | MGLFSGKSKN QPASIVGDDI RRLPNTPTSA YEDGANKFAE IYGSAMVNSG RLFAITVVAL
LLAITAVGAV MVLTPLKEVT PYVIEVNSGS GLVNKPIEVQ KITPNIAVVK AELARWADAV
YTIDPLRTND LFKYANVRSR GKAIAQFSEF RAREQVFARL QREAGLVREV QVSSVDASQT
GVAFIFLKTL ERTGNQSAED SKVKRYRLTL HYQLDSPREE AALLANPLGL YVNFFNEAEE
RAN
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