Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2824 |
Symbol | |
ID | 8829236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013930 |
Strand | + |
Start bp | 179634 |
End bp | 180416 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | Type IV secretory pathway TrbF protein-like protein |
Protein accession | YP_003494776 |
Protein GI | 290243106 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGA AACTGCTTGG AGCAATTCGC CAGGAGGCGT CGGCGGGGAA CGCTGAGGCG TCGGTGGAGG CTAAAAAGAA GAGTCAGCCG AGTAATAAAA AGAGAAAGAC TGGGACGCCG CCTGAGAATG CGCCACCGTC AGCCTTGGAT GCGCGCACTC TGAAGCAGCG GTTTCTCCAT GAGGGAGCGC TGGAGGTTGA GCGAAACCGG TACTTTGTCG CGCTCATGGC GATGGCAGGT GTAGTGGCAA TGCTTGGTGC GGCCATTATG GCGCTGACGC CGCTCAAAGA AGTGACACCC TATGTGATCG AGACCGATAA CGTCGGGCGA ACGGCCGTGT CGGATGCGCA AGTGCGCGAA TTCGAGCCCA CAGAGATTCA GCTTCGGTAC TTCCTGGCCG AATGGACGGA TCACATGATG ACGGTGCGTC CTGGGGTGAC CACTCAAAAC CTCCCGCAGG CCTTCAACAA GACCGAGGGG ACGGCTTCGC GCCAGTTCCG AGAGCACATC GATGAATATG ATCCAATCGG GCGGGCGACG AGCAACCCCG AGCGCACGGT CGATACGCGA ATTCGGTCGA TCAACTTTCT CCCGAACCAG GCCGTTATGA TACAGTTTCA CACGCTTGAG CGAGGTCCAG ATCAGGCGGA TCAGCGAACG GATTACTCGC TGGCGATCAA CTACGAGACG TATCGGCCGC AGACCGAAGA GCAGATCCTG GAGAACCCGG TCGGTCTCGT GATCACCAAC TTCAACCTCA CAAGGGATAT GGGGGGTCAG TAA
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Protein sequence | MLKKLLGAIR QEASAGNAEA SVEAKKKSQP SNKKRKTGTP PENAPPSALD ARTLKQRFLH EGALEVERNR YFVALMAMAG VVAMLGAAIM ALTPLKEVTP YVIETDNVGR TAVSDAQVRE FEPTEIQLRY FLAEWTDHMM TVRPGVTTQN LPQAFNKTEG TASRQFREHI DEYDPIGRAT SNPERTVDTR IRSINFLPNQ AVMIQFHTLE RGPDQADQRT DYSLAINYET YRPQTEEQIL ENPVGLVITN FNLTRDMGGQ
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