12 homologs were found in PanDaTox collection
for query gene Rcas_2948 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_2948  FmdB family regulatory protein  100 
 
 		 80 aa  162  1.0000000000000001e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.827957  hitchhiker  0.00103646 
 
 
-
 
NC_011831  Cagg_0322  regulatory protein, FmdB family  62.5 
 
 		 78 aa  105  2e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.71311  normal  0.241427 
 
 
-
 
NC_009523  RoseRS_3107  FmdB family regulatory protein  86.25 
 
 		 95 aa  103  5e-22  Roseiflexus sp. RS-1  Bacteria  normal  0.485434  normal  0.294544 
 
 
-
 
NC_009972  Haur_2075  hypothetical protein  52.63 
 
 		 115 aa  73.9  0.0000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0405722  n/a   
 
 
-
 
NC_009523  RoseRS_0880  FmdB family regulatory protein  41.07 
 
 		 78 aa  43.9  0.0007  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0842902 
 
 
-
 
NC_002936  DET1468  hypothetical protein  39.58 
 
 		 71 aa  43.9  0.0008  Dehalococcoides ethenogenes 195  Bacteria  normal  0.337511  n/a   
 
 
-
 
NC_009455  DehaBAV1_1269  FmdB family regulatory protein  39.58 
 
 		 71 aa  43.9  0.0008  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_4083  FmdB family regulatory protein  54.55 
 
 		 75 aa  43.5  0.001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.382844 
 
 
-
 
NC_014210  Ndas_3419  regulatory protein, FmdB family  41.82 
 
 		 77 aa  42.7  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2441  FmdB transcriptional regulator  47.83 
 
 		 77 aa  42.7  0.002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2774  regulatory protein, FmdB family  36.49 
 
 		 78 aa  42  0.003  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_1245  hypothetical protein  37.5 
 
 		 82 aa  41.6  0.003  Dehalococcoides sp. VS  Bacteria  normal  0.265358  n/a   
 
 
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