8 homologs were found in PanDaTox collection
for query gene Ppha_0580 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011060  Ppha_0580  hypothetical protein  100 
 
 
230 aa  474  1e-133  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.440699  n/a   
 
 
-
 
NC_007404  Tbd_1791  hypothetical protein  27.67 
 
 
230 aa  60.8  0.00000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.769347  normal 
 
 
-
 
NC_007614  Nmul_A0247  hypothetical protein  24.14 
 
 
227 aa  55.5  0.0000008  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2022  hypothetical protein  23.04 
 
 
226 aa  51.6  0.00001  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.672129 
 
 
-
 
NC_010524  Lcho_2351  EpsI family protein  26.09 
 
 
238 aa  51.6  0.00001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_1018  hypothetical protein  21.17 
 
 
215 aa  47.4  0.0002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2368  methanolan biosynthesis EpsI  21.74 
 
 
248 aa  43.1  0.003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0721  hypothetical protein  23.03 
 
 
250 aa  42.7  0.005  Methylibium petroleiphilum PM1  Bacteria  normal  0.34975  normal 
 
 
-
 
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