Gene Swit_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2368 
Symbol 
ID5197907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2631555 
End bp2632301 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content68% 
IMG OID640581914 
Productmethanolan biosynthesis EpsI 
Protein accessionYP_001262865 
Protein GI148555283 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02914] EpsI family protein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACACCGACGA CCGCCGCCTG CTGTCGCGGC GCGCGTTGAT CGCGGGCGGA 
CTGCTGACCG GCGCGGGGGT CGTCGCCAAT GCCCGGCGGC CCGACATCCC CTTCCGCATG
ATCAAGGAAG CGAAGCTCAA CCCGCTCTTC CCCTGGACGA TCGGCGACTG GGAATATCAG
ACGAGCAGCG GCCTGGTGCT GCCGCCGCCC GACCAGATGA GCGACCGGCT CTACAACGCG
ATCATCACCC GCTATTACGC GTCGCCCACC CAGCTCCCGG TCATGCTCCT GGTCGCCTAT
AACGGCATCC AGGACGGCAT GCTGCAGGTC CACCGGCCAG AGGTCTGCTA TCCGGCGGCG
GGCTATGCGA TCGAGCATGA GCGGCTGATC GCCCTCGACG CGGGCGGCGG GGTCGAGGTG
CCCGGCCATT ATCTCGCCGC GCGCAGCGTC AGCCGCCACG AGCAGCTCAT CTACTGGACG
CGGATCGGCA ACGACTTCCC GACCCAGTGG TGGCAGCAGC ACTGGGCGGT GGCGAAGGAG
AATCTGAAGG GGCGGGTGCC CGACGGCATG CTGATCCGCT TCTCGACCGC GGCGCCCGAC
GACAAGACCG CGATCCTGAC GCTCAAGCGC TTCCTGAAGC CCTTCTTCGC CTCGCTCTCC
CCCACCGCGC GGCGGCTGGT GCTGGGCGAG GCCGGCGCGC CGGGGCTGAA GGACCAGATT
CTTTCGAGCC AGCCGAAATC GCGCTGA
 
Protein sequence
MSDDTDDRRL LSRRALIAGG LLTGAGVVAN ARRPDIPFRM IKEAKLNPLF PWTIGDWEYQ 
TSSGLVLPPP DQMSDRLYNA IITRYYASPT QLPVMLLVAY NGIQDGMLQV HRPEVCYPAA
GYAIEHERLI ALDAGGGVEV PGHYLAARSV SRHEQLIYWT RIGNDFPTQW WQQHWAVAKE
NLKGRVPDGM LIRFSTAAPD DKTAILTLKR FLKPFFASLS PTARRLVLGE AGAPGLKDQI
LSSQPKSR