6 homologs were found in PanDaTox collection
for query gene Pnec_1117 on replicon NC_010531
Organism: Polynucleobacter necessarius subsp. necessarius STIR1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010531  Pnec_1117  hypothetical protein  100 
 
 
121 aa  248  3e-65  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.563345 
 
 
-
 
NC_008786  Veis_4017  hypothetical protein  32.97 
 
 
430 aa  46.6  0.0001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.231332  normal  0.514281 
 
 
-
 
NC_011662  Tmz1t_1488  hypothetical protein  34.88 
 
 
433 aa  45.4  0.0002  Thauera sp. MZ1T  Bacteria  normal  0.713226  n/a   
 
 
-
 
NC_007484  Noc_1405  hypothetical protein  27.27 
 
 
430 aa  42.4  0.002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3211  hypothetical protein  37.21 
 
 
435 aa  42  0.003  Rhodoferax ferrireducens T118  Bacteria  normal  0.218729  n/a   
 
 
-
 
NC_008781  Pnap_2555  hypothetical protein  32.26 
 
 
445 aa  41.2  0.005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.737011  normal  0.0456434 
 
 
-
 
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