Gene Pnec_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1117 
Symbol 
ID6183734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp975469 
End bp975834 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content48% 
IMG OID641671725 
Producthypothetical protein 
Protein accessionYP_001797902 
Protein GI171463789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.563345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAT ACGATCACCC TTCTAGAGCG CTATTACACG AAGAGGTTCA TGCGCGACCT 
CCTATTCCAT TGTGGCCAAA TGAGAGGGTG ATTTCACAAT CCTTCTTGCT AGATGCTGCA 
ACTCGTCAAC AGCAAATTGC CTGGGTGCAA AAGCTAAGTA GCGCCTTAGG ATGCGCCCTC 
AGTAGTGACG ACCACTCTTT TATGACGCTT TATTTGGCGC CAGAGCCCGA AAGGGTGTTG 
GTGAAGTGGG AGTTGCATGG TGAATTCGCG ACCATTGCGG TGATTATTCA CAATAAAACT 
AAAGTTAAGG AACCTTTGCT CAAGTCGAGA CTAGAAATTG AGCATGACCT GGAGCCAGGG 
GTTTAG
 
Protein sequence
MRPYDHPSRA LLHEEVHARP PIPLWPNERV ISQSFLLDAA TRQQQIAWVQ KLSSALGCAL 
SSDDHSFMTL YLAPEPERVL VKWELHGEFA TIAVIIHNKT KVKEPLLKSR LEIEHDLEPG 
V