Gene Pnap_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2555 
Symbol 
ID4687172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2692491 
End bp2693828 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content67% 
IMG OID639835563 
Producthypothetical protein 
Protein accessionYP_982779 
Protein GI121605450 
COG category[S] Function unknown 
COG ID[COG4949] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.737011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0456434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCA GCCCGCCGCC AGCTTCCCTT GCCGCCAGTT TTCTGCCGCC TGACGACCCC 
TTGCGTGTCA AGCTGCACAA CGAGGTGCAT GCTCGGCCCT CGGCCCGCGT GCGGCTGCCG
GCCCTCATCA TCTACGTGGC CGTGCTCAAC GCGGGCGTGA CGCGCGAGCA GGAGCGCGAC
CATCTGAGTC GCCTGCCCGG GCAGCAGGAA TTGCCGCTGG ACAGCCTGCA CGGCAACTTC
CTGCGTCTGC GCTTTGAGGG TTACACGGTC AAATGGGAGC GGCACACCGA GTTCACCCGT
TACTCCATCG TGCAGCCGCT GCCCGCCGAC GCACAGCTGG GGGCTTCGGA CCCGGAGTTG
CTGTCTGACC CGGTCGTCAC GCCTGACTGG CTGCGCGGCA TTCCCGGGCA TACCGTGGCG
GCCATCCAGA TGGCCATGGT TCACGGGGAT CTTTCCGACG AGCGGGTGCT GATGGGACAG
GCGCAGGCCT GGTTCGGCGG GCGGACCGTG GTGGCTTCGC AACTGGGCAA CGGGCACTCG
TGGGCGGTGA CTGAATTCTG CATCGGGGCC GACGGCTTTG AGCGCATGCT GGTGATCGCG
CCGGCGGACA TGTCCGAGAC GCGCGCCAGC CGCGTCTCGC AGCGTCTGCT GGAGATTGAA
ACCTACCGCC TGATGGCGCT GCGCGGCCTG CCCGTGTCCA AGCAGCTGGC GCCCCTGCTG
GGCGAGGCCG AACGACAGCT GTCGGAAATC ACGGCGCGGC TGGAGAACAA GGCGGCGTCC
GACCAGGAAC TGCTGGACAC GCTGGTGTCG CTGGCAGCTC GCGTGGAGCG CGCCATCGCC
GAGCATGGTT ACCGCTTCTC GGCCACGCGC GCCTACGACA TGCTGGTGGG CCAGCGCATC
ACCGAGCTGC GCGAAAAAGC AATTCCGGGG ACGCAGACCA TCGGCGAGTT CATGCAGCGC
CGCCTGTCGC CAGCCATGTC CACGGTGGCG GCCACGGCGC AGCGCCTGGC GTCGTTGTCC
GAACGCGTTT CGCGCACCAG TGCGCTGCTG CGCACCCGGG TGGACATTGC CACCGAAAGC
CAGAACCAGC TGCTGCTGGA AAAGCTCACG CGCGGGCAAG AGCTGCAGCT GCGCCTGCAA
TCAACGGTGG AAGGCCTGTC GATTGCCGCC ATCTCGTACT ACGTGATCAG CCTGCTGCTC
TACGGCGGCA AGGCGGCCAA GGCGGCGGGC GCGCCGGTCA ACCCTGAAAT GCTGGTCGGC
GCCGCGATTC CGCTGGTGCT GTGGCTGGTG TGGCGCAACA TCCGGCGCAT CCATGCCAAG
CTGCATGGCG GGGATTGA
 
Protein sequence
MILSPPPASL AASFLPPDDP LRVKLHNEVH ARPSARVRLP ALIIYVAVLN AGVTREQERD 
HLSRLPGQQE LPLDSLHGNF LRLRFEGYTV KWERHTEFTR YSIVQPLPAD AQLGASDPEL
LSDPVVTPDW LRGIPGHTVA AIQMAMVHGD LSDERVLMGQ AQAWFGGRTV VASQLGNGHS
WAVTEFCIGA DGFERMLVIA PADMSETRAS RVSQRLLEIE TYRLMALRGL PVSKQLAPLL
GEAERQLSEI TARLENKAAS DQELLDTLVS LAARVERAIA EHGYRFSATR AYDMLVGQRI
TELREKAIPG TQTIGEFMQR RLSPAMSTVA ATAQRLASLS ERVSRTSALL RTRVDIATES
QNQLLLEKLT RGQELQLRLQ STVEGLSIAA ISYYVISLLL YGGKAAKAAG APVNPEMLVG
AAIPLVLWLV WRNIRRIHAK LHGGD