| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1405 |
|---|
| Symbol | |
|---|
| ID | 3706091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 1556755 |
|---|
| End bp | 1558047 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637737895 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_343424 |
|---|
| Protein GI | 77164899 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4949] Uncharacterized membrane-anchored protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATAC CCGTCGATCA TCCGCAGCGC CTACTGCTGA ACCATGAATT ACACGCCCGG
CTGCCAGAAT CGCTAGCACC CCCAGAGCAG ATATCTCATC TTGTGCTTTC CTCCGATGCG
GAAATGGTTC AGCAAGAGCG GGAGAAGTTA ACGGAAATTT GCATCCGGTT TGGCCATCCT
ATTCCGACCT CAAAAGATAA TCATCTTCGC ATTGATCTGG GTCCATTCCG CCTCCAATGG
GAAAAACATA CTGAATTCAC TAGCTATACT TTTTTTCGGC GCGGCCCATT CCAGGAACCA
TTCGCCAACA CCGTCATAGA AAGCATCCCC CAGGACTGGC TCGCGGAACT ACCTGGCCAG
GTGCTCGTTG CTGCTCATTT GGCCATCTAC CCTCTACCGG AAAAACCGCG CAACCCGGAT
GAGCTTGCTG CCGCCCTGTT TGAAGGCAAT GCCGTTACAG GCGCCCGTAT TGGCGAAGGG
GCAGGAATCG CTTACGCCGA TTTTCGCCTC CATAAAGACG GATTTAGCCG CTTTATCATT
AAGGATATCA GTCTCACCCC ACGCCAGGCC GGGCGGGCGG TACAGCGCCT CCTGGAGATC
GAGTCCTATC TCATACAGGC ATTGCGGACC TACCCACTGG CGCGCAGAAC CATGCCCATG
CTAGGACACG CCGAGCAGGA ATTAGCCCAA ATTACCGAGG CCATCGCCTC GGCTACCACC
GAAGAGGAAT CGGAGCTGCT CGATCAGCTC ACCAAATTAG CGGCCTCTAC CGAAAGCCTG
GCTTCTTCGA TCCAATATCG AATCACCGCA GCCCAGGCTT ACTACGAATT GGTGCAGCGG
CGCATTAACG AACTGCGTGA GCTGCGGGTT GAAGGCATGC AAACCTTTCG CGAGTTTTGT
GAACGGCGCA TGGGACCAGC CATGCATACT TGCGAGACTG TACTCCGGCT ACAGGAAAAT
CTGTCCCGAC GCATTGGCCG TGCAAGCGAA TTACTACGCA CCAGGGTAAA TATTTCCCTT
GAGCACCAAA ATCAACAAGT GCTCTCTTCC ATGGCAGAAC GGGCCAAGCT TCAGCTCCAC
TTGCAGGAAA CAGTGGAAGG GCTCTCCGTC GCCGCCATCA CCTATTACGT GGTTGGCCTG
GTCGGTTATC TCGCCAGGGC GGCAGAAGCA GCAGGCTTAC CCATCAATCC AGATTTAACC
ATCGGCATAT CAATCCCAGT CGTCGCGTTA TCGGTAGCCC TGAGTGTACG GAAAATCCGG
CGTATGGTAT CAAGAAACCA CGACGTTGAC TGA
|
|---|
| Protein sequence | MTIPVDHPQR LLLNHELHAR LPESLAPPEQ ISHLVLSSDA EMVQQEREKL TEICIRFGHP
IPTSKDNHLR IDLGPFRLQW EKHTEFTSYT FFRRGPFQEP FANTVIESIP QDWLAELPGQ
VLVAAHLAIY PLPEKPRNPD ELAAALFEGN AVTGARIGEG AGIAYADFRL HKDGFSRFII
KDISLTPRQA GRAVQRLLEI ESYLIQALRT YPLARRTMPM LGHAEQELAQ ITEAIASATT
EEESELLDQL TKLAASTESL ASSIQYRITA AQAYYELVQR RINELRELRV EGMQTFREFC
ERRMGPAMHT CETVLRLQEN LSRRIGRASE LLRTRVNISL EHQNQQVLSS MAERAKLQLH
LQETVEGLSV AAITYYVVGL VGYLARAAEA AGLPINPDLT IGISIPVVAL SVALSVRKIR
RMVSRNHDVD
|
|---|
| |