| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1488 |
|---|
| Symbol | |
|---|
| ID | 7083570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 1660400 |
|---|
| End bp | 1661701 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643698505 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002355142 |
|---|
| Protein GI | 217969908 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4949] Uncharacterized membrane-anchored protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.713226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCC TCTTCGAACA GCACCCCCTG CGCCAGACGC TCAGCGACGA GGTGCACGCG
CGCCCGCCGG TGCCGCTGGA CACCCCGGAA TTCGTCACCT ACCTCGCCTT CCTGCACCAC
GAAGGCAGCG CCGGGCGCGA GGCGGACCAC CTCGCGGCGC TGGCCGGGCA GCTCGGCCAG
CCCGCGCCGG ACATCGACTC GGGCCACGTG CTGCTCGAGG CCGAGGGTTT CCGGCTGAAG
TGGGAGCGCC ACAACGAGTT CTCCAGCTAC TGCTTCTTCC GCCGCATCGA GCCCGACGAC
AGCCCCGACG ACTACGCCCT GCTGCACGTG CCCGCGGCGT GGCGCAAGGC CATCCCCGGC
CTGCTGATCG CCGCCACCCA CATCGAGCTG CGCGACGTCG GCGAGGTGCC GCTGGAGACG
GTGCTGCACC AGCAGTCGCG CCACGGCCAG GCGCTGGTCG CCTCCGGCGT CTCGGACGGC
GCCGGCTGGG TGCTCACCGA CTTCCACCTG CACGACGGCT TCTCGCACTT CCTGCTGCTC
GACAAGGGCT TCACCCCGCG CCAGGCCGGC CGCATCGCCC AGCGCCTGGT CGAGATCGAG
ACCTACCGCG TCATGGCGCT GCTCGCCTTC CCGGTGGCCA AGGACACCGG CCGCCTGGTC
TCGCGCGCCG AGGACGAGCT CGCCGACCTC ATGGACGGCA TGGGCCGGTC GCGCAGCGCC
GAGGACGACC GCGCGGTGCT CGCCCGCCTG TCCCGCCTGG CCGCCGAGGT CGAGCGCTCG
GTGGCGCGCA CCACCTTCCG CTTCGGCGCC GCCGCGGCCT ACTACCGCCT GGTGCGCCAG
CGCATCGACG ACCTGCGCGA ACAGCGCCTG CCCGGCTTCT CGCCGATCGG CGAGTTCATG
GACCGCCGCC TCGTCCCCGC GATCGACACC TGCACCTCGA TCGCGCGCCG CCAGGACGAC
CTCTCCGGCC GCATCGCGCG CAACTCGCAG CTGCTGCGCA CCCGCGTCGA CATCGAGATC
GAGCGCCAGA ACCAGGAGCT GCTCGCGCAG ATGAACCGCC GCGCCAAGAT CCAGCTCCAC
CTTCAGGAGA CCGTTGAAGG GCTGTCGGTG GTGGCGATCA CCTACTACGC CTCGCAGCTG
GTGAACTACG TCGCCAAGGG CGCAAAGCAC CTGATCGAGC CGCTGACGCC GGAGGTGCTC
ACCGCGGTGT CGATCCCGGT CATCGCCGGC ATCGTCTTCA TGGGGCTGCG GCGGATGCGC
AAGCTGCTGG GCACGGAAGA GGACGGCCAG GCCCACCCTT GA
|
|---|
| Protein sequence | MSSLFEQHPL RQTLSDEVHA RPPVPLDTPE FVTYLAFLHH EGSAGREADH LAALAGQLGQ
PAPDIDSGHV LLEAEGFRLK WERHNEFSSY CFFRRIEPDD SPDDYALLHV PAAWRKAIPG
LLIAATHIEL RDVGEVPLET VLHQQSRHGQ ALVASGVSDG AGWVLTDFHL HDGFSHFLLL
DKGFTPRQAG RIAQRLVEIE TYRVMALLAF PVAKDTGRLV SRAEDELADL MDGMGRSRSA
EDDRAVLARL SRLAAEVERS VARTTFRFGA AAAYYRLVRQ RIDDLREQRL PGFSPIGEFM
DRRLVPAIDT CTSIARRQDD LSGRIARNSQ LLRTRVDIEI ERQNQELLAQ MNRRAKIQLH
LQETVEGLSV VAITYYASQL VNYVAKGAKH LIEPLTPEVL TAVSIPVIAG IVFMGLRRMR
KLLGTEEDGQ AHP
|
|---|
| |