6 homologs were found in PanDaTox collection
for query gene PSPTO_2013 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_2013  hypothetical protein  100 
 
 
220 aa  451  1.0000000000000001e-126  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3409  hypothetical protein  30.91 
 
 
609 aa  96.7  3e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.252651 
 
 
-
 
NC_004578  PSPTO_2007  hypothetical protein  32.89 
 
 
618 aa  83.6  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2009  hypothetical protein  29.61 
 
 
539 aa  69.3  0.00000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.401812  n/a   
 
 
-
 
NC_007005  Psyr_0355  hypothetical protein  27.16 
 
 
239 aa  45.4  0.0007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3826  hypothetical protein  32.56 
 
 
485 aa  43.9  0.002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
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