Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3409 |
Symbol | |
ID | 3368936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4071519 |
End bp | 4073348 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637653760 |
Product | hypothetical protein |
Protein accession | YP_236479 |
Protein GI | 66046638 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.252651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCAAA AAAACAATTT TTACACACGC AGCCCCAATC AAGAACTGAC GCTCATACCA CCGTTTGTTC CTGTCGCCGA TGAAGCGGAC GGACTTATAA AAACTGCCGA CCTTGTCAAT GACATCATCG TCGAATTTCC GGTCTGGGAA GGTGCCAGGC TTCAAGACTC TTACCAGTTG CAATTGAATG GCGATAAAGT TGGTTTAGCA GGTCAACTGG TACCTCTTCC ACCGGTCGGA ACGTTACTAC GCTTGACCAT CCCCGTCGAC ACCGAACTGA AAGACGATGG CGCGTACAAA CTTGACTACT TGACGATCGG TTATCCCAGT GGTACCGAGC AATCGTCCCA AATCAAAACG ATTATTGTCG ACCGCACCGC TCCGGGCGCC CATCAACTGG GTTATATGGA TTTTCCAGCC GGGGCCAAAG ATGGTCTGAC ACTTGAAGAG CTTCAGTCCA TGGGCGGTGT ATTGACCGGT AGCATTTTCG GGTATTCGGG ACTGAATCGC GGCGACGTTA TCAAAACCTA TTGGGGAAAC GTGCCCGGTC CAGAGCTTGA ACTGAACGGC CTGGAAGATG AAAGTCAAGC GATCGAAATC CTGTTTACCC AAGAGTTTCT TACTGCTCTC GGCAGCCCTG CAGGCGCAAC CTATTACACG GTGACAGACC GGGCCGGAAA CACGTCTGCC GAGTCTCAGA AGATTACCAT CCCTCTGTTT CTGACCGACG TGACACCAGG ACTGCCTGCT CCGGTTATCG ATAATAACGA CGGCGTGATT GATTACGCAG AGGCCATGGC CAGCGTCGAA GTGAAAATTC CTTTCTCGTC TTTTTTGATG GAAGGCGATC AGATTCTCCT GCACTGGGGT TCTGAAGAGT TAGGGCCTGC TTCTATTGCC GTGGAAGACC TGGACGAGCC TTTCATTCTG TTTTTTGATG TTCCGTACCT GATCATTGAA CAGGCTCAGA ATGGTCTGCG CGATATCAAG TATGACGTCA TTAGAAATGG ACAGGTTACC GGTACTTCAG ACCCTCTTGA GGTGCTTGTC AACATCGAGC TGCCCGTGCC CGGCGTTCTC GACAAACCGA CGATCAAAGG TAGCAGCAGC ACGCCCAGCA ACGAAGACAA CTTTATTGAT GAGAACGACT TTGAACTTGA CGCCACCGTC TTGATTAACT GGAACCCTCT CTTTAAGGCC AATCAGATCT TGACGGTCTT TTGGGGCGGC CAAGAAGTAT TGGAACAACC CTACACGCTC ACCAACAGCG ACGTCGTCGC CGGCCGTACG CTGTTGCTCA CTGCACTGAA CAGTAAGTTC ACCGCCGTGG GCACAGGTAA CGACATCAGA GTTTATTACA CCGTCAAAAC CGAGGGTAAT CCCAATCTCT CCACGTCATC AGAGCAGGGC TTGATCGTGC GTTCAAAAAA TGAATTACCG GGTGGCCCGG ACGGACCAGA AGCGCCGCAA TTTATGTCGC TGTCTGCCAA CGGCACGCTC ACTTTTGAAA ACAGTGCGCA AGGCGCCCCC ATTTTTATCC AACCCTATTT AAATATGGCC CCAGGACACG TCATTGTCTT CACCTATGAA GCCTACAACG AACTGGTGGG CGATGATAAA AAATTCGAAT GGTCAGTCAC GTCACCGGCC CTCACTCAGG AAGAAGTCCA GAACGGCGTT AATATTCTGG TGCCCCGCAC TGTATTGAAC CAGCACTGTT ACGGGCATGC CGAGATCAGC TTCCAGGTAA GAAGCAGTAT GGGCCAAGGT AACTCGAAAC GCGCCAGCGC CTACGTCGAT ATGCGTGTCG GTGGACTCTG CAGAATTTGA
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Protein sequence | MRQKNNFYTR SPNQELTLIP PFVPVADEAD GLIKTADLVN DIIVEFPVWE GARLQDSYQL QLNGDKVGLA GQLVPLPPVG TLLRLTIPVD TELKDDGAYK LDYLTIGYPS GTEQSSQIKT IIVDRTAPGA HQLGYMDFPA GAKDGLTLEE LQSMGGVLTG SIFGYSGLNR GDVIKTYWGN VPGPELELNG LEDESQAIEI LFTQEFLTAL GSPAGATYYT VTDRAGNTSA ESQKITIPLF LTDVTPGLPA PVIDNNDGVI DYAEAMASVE VKIPFSSFLM EGDQILLHWG SEELGPASIA VEDLDEPFIL FFDVPYLIIE QAQNGLRDIK YDVIRNGQVT GTSDPLEVLV NIELPVPGVL DKPTIKGSSS TPSNEDNFID ENDFELDATV LINWNPLFKA NQILTVFWGG QEVLEQPYTL TNSDVVAGRT LLLTALNSKF TAVGTGNDIR VYYTVKTEGN PNLSTSSEQG LIVRSKNELP GGPDGPEAPQ FMSLSANGTL TFENSAQGAP IFIQPYLNMA PGHVIVFTYE AYNELVGDDK KFEWSVTSPA LTQEEVQNGV NILVPRTVLN QHCYGHAEIS FQVRSSMGQG NSKRASAYVD MRVGGLCRI
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