Gene Psyr_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3409 
Symbol 
ID3368936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4071519 
End bp4073348 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content51% 
IMG OID637653760 
Producthypothetical protein 
Protein accessionYP_236479 
Protein GI66046638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.252651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAAA AAAACAATTT TTACACACGC AGCCCCAATC AAGAACTGAC GCTCATACCA 
CCGTTTGTTC CTGTCGCCGA TGAAGCGGAC GGACTTATAA AAACTGCCGA CCTTGTCAAT
GACATCATCG TCGAATTTCC GGTCTGGGAA GGTGCCAGGC TTCAAGACTC TTACCAGTTG
CAATTGAATG GCGATAAAGT TGGTTTAGCA GGTCAACTGG TACCTCTTCC ACCGGTCGGA
ACGTTACTAC GCTTGACCAT CCCCGTCGAC ACCGAACTGA AAGACGATGG CGCGTACAAA
CTTGACTACT TGACGATCGG TTATCCCAGT GGTACCGAGC AATCGTCCCA AATCAAAACG
ATTATTGTCG ACCGCACCGC TCCGGGCGCC CATCAACTGG GTTATATGGA TTTTCCAGCC
GGGGCCAAAG ATGGTCTGAC ACTTGAAGAG CTTCAGTCCA TGGGCGGTGT ATTGACCGGT
AGCATTTTCG GGTATTCGGG ACTGAATCGC GGCGACGTTA TCAAAACCTA TTGGGGAAAC
GTGCCCGGTC CAGAGCTTGA ACTGAACGGC CTGGAAGATG AAAGTCAAGC GATCGAAATC
CTGTTTACCC AAGAGTTTCT TACTGCTCTC GGCAGCCCTG CAGGCGCAAC CTATTACACG
GTGACAGACC GGGCCGGAAA CACGTCTGCC GAGTCTCAGA AGATTACCAT CCCTCTGTTT
CTGACCGACG TGACACCAGG ACTGCCTGCT CCGGTTATCG ATAATAACGA CGGCGTGATT
GATTACGCAG AGGCCATGGC CAGCGTCGAA GTGAAAATTC CTTTCTCGTC TTTTTTGATG
GAAGGCGATC AGATTCTCCT GCACTGGGGT TCTGAAGAGT TAGGGCCTGC TTCTATTGCC
GTGGAAGACC TGGACGAGCC TTTCATTCTG TTTTTTGATG TTCCGTACCT GATCATTGAA
CAGGCTCAGA ATGGTCTGCG CGATATCAAG TATGACGTCA TTAGAAATGG ACAGGTTACC
GGTACTTCAG ACCCTCTTGA GGTGCTTGTC AACATCGAGC TGCCCGTGCC CGGCGTTCTC
GACAAACCGA CGATCAAAGG TAGCAGCAGC ACGCCCAGCA ACGAAGACAA CTTTATTGAT
GAGAACGACT TTGAACTTGA CGCCACCGTC TTGATTAACT GGAACCCTCT CTTTAAGGCC
AATCAGATCT TGACGGTCTT TTGGGGCGGC CAAGAAGTAT TGGAACAACC CTACACGCTC
ACCAACAGCG ACGTCGTCGC CGGCCGTACG CTGTTGCTCA CTGCACTGAA CAGTAAGTTC
ACCGCCGTGG GCACAGGTAA CGACATCAGA GTTTATTACA CCGTCAAAAC CGAGGGTAAT
CCCAATCTCT CCACGTCATC AGAGCAGGGC TTGATCGTGC GTTCAAAAAA TGAATTACCG
GGTGGCCCGG ACGGACCAGA AGCGCCGCAA TTTATGTCGC TGTCTGCCAA CGGCACGCTC
ACTTTTGAAA ACAGTGCGCA AGGCGCCCCC ATTTTTATCC AACCCTATTT AAATATGGCC
CCAGGACACG TCATTGTCTT CACCTATGAA GCCTACAACG AACTGGTGGG CGATGATAAA
AAATTCGAAT GGTCAGTCAC GTCACCGGCC CTCACTCAGG AAGAAGTCCA GAACGGCGTT
AATATTCTGG TGCCCCGCAC TGTATTGAAC CAGCACTGTT ACGGGCATGC CGAGATCAGC
TTCCAGGTAA GAAGCAGTAT GGGCCAAGGT AACTCGAAAC GCGCCAGCGC CTACGTCGAT
ATGCGTGTCG GTGGACTCTG CAGAATTTGA
 
Protein sequence
MRQKNNFYTR SPNQELTLIP PFVPVADEAD GLIKTADLVN DIIVEFPVWE GARLQDSYQL 
QLNGDKVGLA GQLVPLPPVG TLLRLTIPVD TELKDDGAYK LDYLTIGYPS GTEQSSQIKT
IIVDRTAPGA HQLGYMDFPA GAKDGLTLEE LQSMGGVLTG SIFGYSGLNR GDVIKTYWGN
VPGPELELNG LEDESQAIEI LFTQEFLTAL GSPAGATYYT VTDRAGNTSA ESQKITIPLF
LTDVTPGLPA PVIDNNDGVI DYAEAMASVE VKIPFSSFLM EGDQILLHWG SEELGPASIA
VEDLDEPFIL FFDVPYLIIE QAQNGLRDIK YDVIRNGQVT GTSDPLEVLV NIELPVPGVL
DKPTIKGSSS TPSNEDNFID ENDFELDATV LINWNPLFKA NQILTVFWGG QEVLEQPYTL
TNSDVVAGRT LLLTALNSKF TAVGTGNDIR VYYTVKTEGN PNLSTSSEQG LIVRSKNELP
GGPDGPEAPQ FMSLSANGTL TFENSAQGAP IFIQPYLNMA PGHVIVFTYE AYNELVGDDK
KFEWSVTSPA LTQEEVQNGV NILVPRTVLN QHCYGHAEIS FQVRSSMGQG NSKRASAYVD
MRVGGLCRI