Gene PSPTO_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2013 
Symbol 
ID1183658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2199398 
End bp2200060 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content53% 
IMG OID637393391 
Producthypothetical protein 
Protein accessionNP_791836 
Protein GI28869217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT TCACAAGCCC AGCATTGGAG GCACCCTCAG TACCTGTGGC AGAAAGCGAT 
GGCCTGATCA GAGTTCGCGA TCTTGAATCA GGCATTTCGG TCCATTTCAC CGCACGGGGC 
TTAATCAAAG AAAAAGACAG CTTTGAGCTT ATGGTTAACG GTGCTGGCTC CGGGGTTACT 
CAGATCATTT CTGATCCTGA CGCACCTGAA GAGGTGAAGT TCGTTATGAA TCTGCAGCCT 
GAACACTTCG CTAAAGATGG CACTTATGCA ATCGGGTACC AATGGTTAAC TTTTCCGGGC 
GATATTCGGA CAGACTCTGC AACTACTGAG ATTCGGATCG ACCGCACCGC CCCAGGCGCG 
GCGCTGCTGG CTCCTGTCAT TTTCCATCAG ATCAACCTCG GCAACACCCT CACAGGCCTT 
GTCCCAGGCT ACGCAGACAT GCAGCCCGGA GACCGTATCC GGACCTTCTG CAACGACCGG 
CAAGGTCCCG CTTACGTGGT CACCTCCGAC AATCTGACTG ATCGTCCGGT ACCGATCATT 
TTCGACAAGG AGTTTCTGCT GAATCTGCAC AGCGATAGTG TCACGATCAG CTACCGGGTC 
ATCGATCGTG CGGGCAATAT TTCGCTGCCG GCGCGCTCTG TCACACTCTC GATGCAGGTT 
TAA
 
Protein sequence
MNNFTSPALE APSVPVAESD GLIRVRDLES GISVHFTARG LIKEKDSFEL MVNGAGSGVT 
QIISDPDAPE EVKFVMNLQP EHFAKDGTYA IGYQWLTFPG DIRTDSATTE IRIDRTAPGA 
ALLAPVIFHQ INLGNTLTGL VPGYADMQPG DRIRTFCNDR QGPAYVVTSD NLTDRPVPII 
FDKEFLLNLH SDSVTISYRV IDRAGNISLP ARSVTLSMQV