8 homologs were found in PanDaTox collection
for query gene PC1_2272 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_2272  putative transmembrane anti-sigma factor  100 
 
 		 267 aa  549  1e-155  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_3116  putative transmembrane anti-sigma factor  59.18 
 
 		 262 aa  327  1.0000000000000001e-88  Enterobacter sp. 638  Bacteria  normal  0.986339  normal  0.0614531 
 
 
-
 
NC_009832  Spro_4456  putative transmembrane anti-sigma factor  39.53 
 
 		 252 aa  158  8e-38  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_0433  putative transmembrane anti-sigma factor  32.23 
 
 		 267 aa  127  1.0000000000000001e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.799766 
 
 
-
 
NC_011369  Rleg2_0401  putative transmembrane anti-sigma factor  32.84 
 
 		 267 aa  125  6e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.489246 
 
 
-
 
NC_007492  Pfl01_2886  transmembrane transcriptional regulator (anti-sigma-factor)  33.71 
 
 		 252 aa  122  7e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.887162  normal  0.626016 
 
 
-
 
NC_008392  Bamb_5730  putative transmembrane anti-sigma factor  23.6 
 
 		 303 aa  43.9  0.003  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.381936 
 
 
-
 
NC_010622  Bphy_0019  putative transmembrane anti-sigma factor  21.74 
 
 		 277 aa  43.1  0.005  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.836012 
 
 
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