| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2272 |
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| Symbol | |
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| ID | 8133216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2612629 |
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| End bp | 2613432 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865559 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_003017846 |
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| Protein GI | 253688656 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAACACCA TGCGTTTTAC GCCTCCCTAC AGCGACGAGG CCATCGTTGC CTGGCTGGAT
GGCGAGATGA ATGAAGCCGA TGCGCAACGA TTCAAGGCAT TACTTGAGGG AAATGTACAG
CTTGCCGAGC GCGTCGCCGA ACTGATGAAA AGTCAGCTTG ATTTTGAAGC CGCCTTCGCC
CCCTTACTCA ACAAAGCGCC TGAAGCAGCC ATGCAGGCCA GACTTGAGAC GTTAATGACA
AACGCGCCGA CATCAGCGCC CCCGTCACCT CATGCTGGTG TCAGCCGCCG CTCGCTTATT
GCGGCATCAC TCAGTTTTTT GCTGATTGGA TCGGGGTTAG GTTACCTCGC GCGTTCGCCC
CGGATGATTC TCAGCGACAG CGAGAAAATT CGCGATCTTG AGGCGCAGTA CATGTCACTG
TACCGCGCGG AAACCCTACT CGATGCGGAT AATACCGCAC AGACCTTGCA ACGAGGACTC
TCGCGCACGG CTCAGGACAT GGGATTGCAT CTCAATGAGC AACAGCTGAC GCTTCACGAC
GCAGAGTTGA AAATGGTGCG TCTGCTGCGT TATGACAATA TACCGATTGC GCAGATTACC
TGGATGCATG CCGAATATGG ACCGATGGCG CTGTGCATTT CCCCCGAGCG TCAGGCAGCG
TCCACGGCGC TTAACAATGA ACAACGTCAT GATATGCAGG TTGTCTGGTG GTACGCTCAC
CACTATCAGT TCGTCTTAAT TGGCCGTAGC CCTGTTGCCT CAATGACAGA AAGTGCGCGC
AGGTTACAAA CGTCGCTGAC ATAG
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| Protein sequence | MNTMRFTPPY SDEAIVAWLD GEMNEADAQR FKALLEGNVQ LAERVAELMK SQLDFEAAFA
PLLNKAPEAA MQARLETLMT NAPTSAPPSP HAGVSRRSLI AASLSFLLIG SGLGYLARSP
RMILSDSEKI RDLEAQYMSL YRAETLLDAD NTAQTLQRGL SRTAQDMGLH LNEQQLTLHD
AELKMVRLLR YDNIPIAQIT WMHAEYGPMA LCISPERQAA STALNNEQRH DMQVVWWYAH
HYQFVLIGRS PVASMTESAR RLQTSLT
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