9 homologs were found in PanDaTox collection
for query gene Noca_R0019 on replicon NC_008699
Organism: Nocardioides sp. JS614



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_R0019  tRNA-Leu  100 
 
 
77 bp  153  7e-36  Nocardioides sp. JS614  Bacteria  normal  0.512192  n/a   
 
 
-
 
NC_012669  Bcav_R0016  tRNA-Leu  86.84 
 
 
77 bp  71.9  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.442827  normal  0.0561514 
 
 
-
 
NC_010816  BLD_t0019  tRNA-Leu  85.14 
 
 
74 bp  60  0.00000008  Bifidobacterium longum DJO10A  Bacteria  decreased coverage  0.000000251522  n/a   
 
 
-
 
NC_013159  Svir_32170  tRNA-Leu  84.42 
 
 
77 bp  58  0.0000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.933066  normal  0.161534 
 
 
-
 
NC_013172  Bfae_07980  tRNA-Leu  85.94 
 
 
77 bp  56  0.000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096426  n/a   
 
 
-
 
NC_014151  Cfla_R0013  tRNA-Leu  84.21 
 
 
77 bp  56  0.000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0584453  normal 
 
 
-
 
NC_008699  Noca_R0046  tRNA-Leu  96.55 
 
 
74 bp  50.1  0.00008  Nocardioides sp. JS614  Bacteria  normal  0.745536  n/a   
 
 
-
 
NC_013235  Namu_R0050  tRNA-Leu  82.89 
 
 
77 bp  48.1  0.0003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.858981  normal  0.692248 
 
 
-
 
NC_014165  Tbis_R0051  tRNA-Leu  96.3 
 
 
76 bp  46.1  0.001  Thermobispora bispora DSM 43833  Bacteria  normal  hitchhiker  0.000393189 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>