13 homologs were found in PanDaTox collection
for query gene Noc_2408 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007484  Noc_2408  cytochrome c, class I  100 
 
 
117 aa  237  4e-62  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1477  cytochrome c, class I  56.52 
 
 
108 aa  90.9  5e-18  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.223855  n/a   
 
 
-
 
NC_009427  Saro_3478  hypothetical protein  54.93 
 
 
113 aa  80.5  0.000000000000008  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1842  hypothetical protein  47.37 
 
 
119 aa  71.2  0.000000000004  Thauera sp. MZ1T  Bacteria  normal  0.587463  n/a   
 
 
-
 
NC_008781  Pnap_3836  putative p-cresol methylhydroxylase subunit  44.58 
 
 
106 aa  69.3  0.00000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2961  cytochrome c, class I  43.06 
 
 
108 aa  59.7  0.00000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.428474  n/a   
 
 
-
 
NC_007794  Saro_1651  hypothetical protein  41.1 
 
 
109 aa  57.8  0.00000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4390  hypothetical protein  41.67 
 
 
110 aa  55.5  0.0000003  Opitutus terrae PB90-1  Bacteria  normal  normal  0.828991 
 
 
-
 
NC_009426  Saro_3880  hypothetical protein  32.05 
 
 
130 aa  42  0.003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.629035  n/a   
 
 
-
 
NC_009524  PsycPRwf_0605  cytochrome c, class I  30.34 
 
 
216 aa  42  0.003  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00227735  normal 
 
 
-
 
NC_011146  Gbem_1211  hypothetical protein  36.36 
 
 
121 aa  41.6  0.004  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.000000024184  n/a   
 
 
-
 
NC_007517  Gmet_2123  hypothetical protein  30.97 
 
 
132 aa  40.4  0.008  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3062  hypothetical protein  32.86 
 
 
118 aa  40.4  0.008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
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