8 homologs were found in PanDaTox collection
for query gene Noc_1860 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007484  Noc_1860  hypothetical protein  100 
 
 
247 aa  511  1e-144  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0990  hypothetical protein  30.8 
 
 
628 aa  95.9  5e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_0763  hypothetical protein  26.61 
 
 
414 aa  75.9  0.0000000000005  Natrialba magadii ATCC 43099  Archaea  normal  0.0964469  n/a   
 
 
-
 
NC_013530  Xcel_1948  Collagen triple helix repeat protein  31.29 
 
 
610 aa  59.7  0.00000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.584968  n/a   
 
 
-
 
NC_009431  Rsph17025_4354  hypothetical protein  27.61 
 
 
864 aa  58.5  0.00000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.23814  normal  0.363357 
 
 
-
 
NC_007484  Noc_1862  hypothetical protein  27.68 
 
 
318 aa  48.9  0.00007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1859  hypothetical protein  26.37 
 
 
262 aa  44.3  0.002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1947  hypothetical protein  34.29 
 
 
649 aa  44.3  0.002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.326308  n/a   
 
 
-
 
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