| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_4354 |
|---|
| Symbol | |
|---|
| ID | 5086530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009431 |
|---|
| Strand | + |
|---|
| Start bp | 113981 |
|---|
| End bp | 116575 |
|---|
| Gene Length | 2595 bp |
|---|
| Protein Length | 864 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640485910 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170504 |
|---|
| Protein GI | 146280348 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.23814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.363357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGATG CCAGCAAGAA ATCCTGCCTG CCCTGCGGCC TGCATCAACC GATCCGCACC
AACTACTACG ACGGCAAGCC GCTCTTCGCC CGCGACTTCA TCACCGAGCA GGACTACCAC
CGCGGCCATC GCCAGATGCA CAACGCGCTG CTGCACGGGG CCGGAACGGT CTGCGGGCTG
AAGCTGGTCC AGCACCCGTC CGAGACCTGC CGGCGCGACT TTGTCGTGGT CGAGCCGGGG
CTGGCGCTGG ACTGCTGCGG ACAGGAGATC GTGGTGCCGA AGCGGGGGCT GGTGCGGATC
GCGGATCTGC TGCGGGCGGA CCTTGCCCTG CAGGAGCAGC TCGACGGCAG CGCGCATCTC
TTCATCGCCA TCGAGCGGCA GGACTGCGGC GAGGAGAAGG CCCCGGTCAT CCTGCCCGGC
TGCGAGGGCG AGGGCGAGGG CGCGTTTGCC CATGTGGCCG AGGGCTACCG TTTCGTCCTT
CACGCCGGGC GCCCCGAGGA TCTGGCCCGG CACGAGCCGG TCGAGGCGCC CCGGCTCGAT
TGGGTTCACA GCTTTTCCTT CGCCGGGGCG GTGCCTCGGG CCGTGCATGT GAACGAGGGC
GAGTCGCTGG TGCAGCTGGG CGTTCAGGAC GCGCTCGGGG CGCGGCTTCT GGCCCATGAC
GGCAACACCC ACGACCTCGA GGCGCTGATC GGCGGGTCGG CCAGCATCTC GGACACCGCC
TCGGCGCGCG AGGCGCGGCT TCTGTTCGTC GCCGGTGGCG GCTTTGACGC GGCCGCGAAC
GGCGTGGGGA TCTGGCGGGC CGGGGCGCTG GGAACGCCGG TCGAGCCCCT GCGCGTGATC
CCGACCGCGG GGGCGGCGGC GCGGCTGGCG GTGTCGCCCA GCTCGGGGAC GCTCTATGTG
CTGGACGTGA ACGGCGCGGA CAGCCGCCTC GTCTCCTACA GCCGCGAGGT GATCGAGGCC
TATCTCGAGA CCGGCGAGAC GGGGCCGCTC GAGGGTCAGC CAAGCCTCGC CTTCGGGCAT
GGGTTCGGCG GGCCGGAGGA TGCGGCCGCC CGCGGCGCCT CGATGATCGA GATCACCCGC
GACGGGCGTT TCCTGGCCAT CGCCACGCCC GAGGGCGATG CGGCCGGGCG GCTTTACCTG
ATCGACACCG CGCTCTTCCG TCAGGGCGCG CTGACGCCCG AGGCGGCGCG GGCCAGCGGC
TACGCCCCCG CGCCGGGCGC CCGGCTGGTC CTGCTGAACT GGAGCTTTGA CGACGGCTTT
CTCTACACCG CCTCGCAAGA GGACGAGACC ATCCGGCTTG AGCGGTACCG GCTGATCGAC
GCCGGGGCGA GCGTGCAGAA AAGCGGGCGC GGCGTGCGGA TGGCGGGCCG GGCTCTCGAC
ATGGCCCTCG CGCCGACCGA GATGCGGGCC TACCTGCTCC TGGCCGATGC CGAGGGCGTG
ACGCGTTTCA CCACCGTTCC GCTCGATCCG GTGAAGTCGC AGGATGCGGG CGATACGCCG
ACGCTGGGCC TGTCGCCCGA CGCGTTCCGC ATCGAGGGGA TCGGCCTCAA CCTTGCGATG
AACGCGAACG GCACGCGCAT CTATGCCGCG GCCGCCGACC AGCCCGAGAC CCTGCCCGAG
CGCGGGGTGG TGGCGGTGAT CGACATCGCC GAGGAGGATT GCGGGGCGCA TTTCCTTCAG
GCGCTGGAGG GTTGCCGCTT TTGTGGCGAC GGCGCCCACC GGGTCGTGCT GGGGCATGTC
GCGGGCTACC GCTGGCCGGG GCCGGACGCG GACCTGCCGG TGATCCACGA CCGGGCCGAG
GCGCGCGAGG GCGAACTGTT CCTCGACAAC CTGACCCATC GGCCGCTCGT GCCCTCGGCG
GCGACGCTGC GGCAGGTGGT GGACTGCATC CTGGAGCAGG GCGTCGCCGA AGGCCCGCCG
GGGCCCCGCG GCGATCCCGG CGCGCCCGGC AGCAAGGGCG ACAGGGGCGA ACCGGGCGAA
AGGGGAGAGG CCGGCCCGAA GGGCGACACG GGCGACCGGG GGCCCCGCGG CCAGGATGGC
CGGGACGGCG CGGACGGGGC GGGGCTTCTG CCCGGCGTTC CCATCGTCGC GCTGAGCTGG
AGGCACGCCG AGCCCTTCCC CGGCGGGCTG GGCGGCCTGA GCGAGCAGGT GAAGGGGCCG
GGGCTCGCCA TCGCCTTCAA GGGCAAGGTG CTGTGGCCCG CCTTCACGGG CCAGACGAAG
GCCGGGCCCT CGGTCGTGGC GGAACTCGAG ATCCCGGTGG AGGACGATCA CGGCCTCATC
CACTGGGCGC GGCCGCGCAT GATCGCCCAT CCGATCGAGA ACCTGCAGAT CGCGGGCGAC
CTGCTCGAGG GCTGGGATGT GCTCGACGAG GCCGAGGAGG TCGAGGGCTT CTGCCTGCGG
GCCGATGACA ACACGCACTT CGACCTGCGC CTTGATCTGC GGCTGCCCTT CCGCGTCGTC
TTTCACGCCG ATTTCGTGAC GGACCCCGAC GGCATCGCCG TCTCGGGCGC CTTCATCGGC
GGGCGCCTGC CCACCGGCTC CGCGGGCGGG GGAGGCACGT TCCGAAGCTG GTTCCATGTC
AGGGAGGAGA GGTAG
|
|---|
| Protein sequence | MLDASKKSCL PCGLHQPIRT NYYDGKPLFA RDFITEQDYH RGHRQMHNAL LHGAGTVCGL
KLVQHPSETC RRDFVVVEPG LALDCCGQEI VVPKRGLVRI ADLLRADLAL QEQLDGSAHL
FIAIERQDCG EEKAPVILPG CEGEGEGAFA HVAEGYRFVL HAGRPEDLAR HEPVEAPRLD
WVHSFSFAGA VPRAVHVNEG ESLVQLGVQD ALGARLLAHD GNTHDLEALI GGSASISDTA
SAREARLLFV AGGGFDAAAN GVGIWRAGAL GTPVEPLRVI PTAGAAARLA VSPSSGTLYV
LDVNGADSRL VSYSREVIEA YLETGETGPL EGQPSLAFGH GFGGPEDAAA RGASMIEITR
DGRFLAIATP EGDAAGRLYL IDTALFRQGA LTPEAARASG YAPAPGARLV LLNWSFDDGF
LYTASQEDET IRLERYRLID AGASVQKSGR GVRMAGRALD MALAPTEMRA YLLLADAEGV
TRFTTVPLDP VKSQDAGDTP TLGLSPDAFR IEGIGLNLAM NANGTRIYAA AADQPETLPE
RGVVAVIDIA EEDCGAHFLQ ALEGCRFCGD GAHRVVLGHV AGYRWPGPDA DLPVIHDRAE
AREGELFLDN LTHRPLVPSA ATLRQVVDCI LEQGVAEGPP GPRGDPGAPG SKGDRGEPGE
RGEAGPKGDT GDRGPRGQDG RDGADGAGLL PGVPIVALSW RHAEPFPGGL GGLSEQVKGP
GLAIAFKGKV LWPAFTGQTK AGPSVVAELE IPVEDDHGLI HWARPRMIAH PIENLQIAGD
LLEGWDVLDE AEEVEGFCLR ADDNTHFDLR LDLRLPFRVV FHADFVTDPD GIAVSGAFIG
GRLPTGSAGG GGTFRSWFHV REER
|
|---|
| |