Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4354 |
Symbol | |
ID | 5086530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009431 |
Strand | + |
Start bp | 113981 |
End bp | 116575 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640485910 |
Product | hypothetical protein |
Protein accession | YP_001170504 |
Protein GI | 146280348 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.23814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.363357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAGATG CCAGCAAGAA ATCCTGCCTG CCCTGCGGCC TGCATCAACC GATCCGCACC AACTACTACG ACGGCAAGCC GCTCTTCGCC CGCGACTTCA TCACCGAGCA GGACTACCAC CGCGGCCATC GCCAGATGCA CAACGCGCTG CTGCACGGGG CCGGAACGGT CTGCGGGCTG AAGCTGGTCC AGCACCCGTC CGAGACCTGC CGGCGCGACT TTGTCGTGGT CGAGCCGGGG CTGGCGCTGG ACTGCTGCGG ACAGGAGATC GTGGTGCCGA AGCGGGGGCT GGTGCGGATC GCGGATCTGC TGCGGGCGGA CCTTGCCCTG CAGGAGCAGC TCGACGGCAG CGCGCATCTC TTCATCGCCA TCGAGCGGCA GGACTGCGGC GAGGAGAAGG CCCCGGTCAT CCTGCCCGGC TGCGAGGGCG AGGGCGAGGG CGCGTTTGCC CATGTGGCCG AGGGCTACCG TTTCGTCCTT CACGCCGGGC GCCCCGAGGA TCTGGCCCGG CACGAGCCGG TCGAGGCGCC CCGGCTCGAT TGGGTTCACA GCTTTTCCTT CGCCGGGGCG GTGCCTCGGG CCGTGCATGT GAACGAGGGC GAGTCGCTGG TGCAGCTGGG CGTTCAGGAC GCGCTCGGGG CGCGGCTTCT GGCCCATGAC GGCAACACCC ACGACCTCGA GGCGCTGATC GGCGGGTCGG CCAGCATCTC GGACACCGCC TCGGCGCGCG AGGCGCGGCT TCTGTTCGTC GCCGGTGGCG GCTTTGACGC GGCCGCGAAC GGCGTGGGGA TCTGGCGGGC CGGGGCGCTG GGAACGCCGG TCGAGCCCCT GCGCGTGATC CCGACCGCGG GGGCGGCGGC GCGGCTGGCG GTGTCGCCCA GCTCGGGGAC GCTCTATGTG CTGGACGTGA ACGGCGCGGA CAGCCGCCTC GTCTCCTACA GCCGCGAGGT GATCGAGGCC TATCTCGAGA CCGGCGAGAC GGGGCCGCTC GAGGGTCAGC CAAGCCTCGC CTTCGGGCAT GGGTTCGGCG GGCCGGAGGA TGCGGCCGCC CGCGGCGCCT CGATGATCGA GATCACCCGC GACGGGCGTT TCCTGGCCAT CGCCACGCCC GAGGGCGATG CGGCCGGGCG GCTTTACCTG ATCGACACCG CGCTCTTCCG TCAGGGCGCG CTGACGCCCG AGGCGGCGCG GGCCAGCGGC TACGCCCCCG CGCCGGGCGC CCGGCTGGTC CTGCTGAACT GGAGCTTTGA CGACGGCTTT CTCTACACCG CCTCGCAAGA GGACGAGACC ATCCGGCTTG AGCGGTACCG GCTGATCGAC GCCGGGGCGA GCGTGCAGAA AAGCGGGCGC GGCGTGCGGA TGGCGGGCCG GGCTCTCGAC ATGGCCCTCG CGCCGACCGA GATGCGGGCC TACCTGCTCC TGGCCGATGC CGAGGGCGTG ACGCGTTTCA CCACCGTTCC GCTCGATCCG GTGAAGTCGC AGGATGCGGG CGATACGCCG ACGCTGGGCC TGTCGCCCGA CGCGTTCCGC ATCGAGGGGA TCGGCCTCAA CCTTGCGATG AACGCGAACG GCACGCGCAT CTATGCCGCG GCCGCCGACC AGCCCGAGAC CCTGCCCGAG CGCGGGGTGG TGGCGGTGAT CGACATCGCC GAGGAGGATT GCGGGGCGCA TTTCCTTCAG GCGCTGGAGG GTTGCCGCTT TTGTGGCGAC GGCGCCCACC GGGTCGTGCT GGGGCATGTC GCGGGCTACC GCTGGCCGGG GCCGGACGCG GACCTGCCGG TGATCCACGA CCGGGCCGAG GCGCGCGAGG GCGAACTGTT CCTCGACAAC CTGACCCATC GGCCGCTCGT GCCCTCGGCG GCGACGCTGC GGCAGGTGGT GGACTGCATC CTGGAGCAGG GCGTCGCCGA AGGCCCGCCG GGGCCCCGCG GCGATCCCGG CGCGCCCGGC AGCAAGGGCG ACAGGGGCGA ACCGGGCGAA AGGGGAGAGG CCGGCCCGAA GGGCGACACG GGCGACCGGG GGCCCCGCGG CCAGGATGGC CGGGACGGCG CGGACGGGGC GGGGCTTCTG CCCGGCGTTC CCATCGTCGC GCTGAGCTGG AGGCACGCCG AGCCCTTCCC CGGCGGGCTG GGCGGCCTGA GCGAGCAGGT GAAGGGGCCG GGGCTCGCCA TCGCCTTCAA GGGCAAGGTG CTGTGGCCCG CCTTCACGGG CCAGACGAAG GCCGGGCCCT CGGTCGTGGC GGAACTCGAG ATCCCGGTGG AGGACGATCA CGGCCTCATC CACTGGGCGC GGCCGCGCAT GATCGCCCAT CCGATCGAGA ACCTGCAGAT CGCGGGCGAC CTGCTCGAGG GCTGGGATGT GCTCGACGAG GCCGAGGAGG TCGAGGGCTT CTGCCTGCGG GCCGATGACA ACACGCACTT CGACCTGCGC CTTGATCTGC GGCTGCCCTT CCGCGTCGTC TTTCACGCCG ATTTCGTGAC GGACCCCGAC GGCATCGCCG TCTCGGGCGC CTTCATCGGC GGGCGCCTGC CCACCGGCTC CGCGGGCGGG GGAGGCACGT TCCGAAGCTG GTTCCATGTC AGGGAGGAGA GGTAG
|
Protein sequence | MLDASKKSCL PCGLHQPIRT NYYDGKPLFA RDFITEQDYH RGHRQMHNAL LHGAGTVCGL KLVQHPSETC RRDFVVVEPG LALDCCGQEI VVPKRGLVRI ADLLRADLAL QEQLDGSAHL FIAIERQDCG EEKAPVILPG CEGEGEGAFA HVAEGYRFVL HAGRPEDLAR HEPVEAPRLD WVHSFSFAGA VPRAVHVNEG ESLVQLGVQD ALGARLLAHD GNTHDLEALI GGSASISDTA SAREARLLFV AGGGFDAAAN GVGIWRAGAL GTPVEPLRVI PTAGAAARLA VSPSSGTLYV LDVNGADSRL VSYSREVIEA YLETGETGPL EGQPSLAFGH GFGGPEDAAA RGASMIEITR DGRFLAIATP EGDAAGRLYL IDTALFRQGA LTPEAARASG YAPAPGARLV LLNWSFDDGF LYTASQEDET IRLERYRLID AGASVQKSGR GVRMAGRALD MALAPTEMRA YLLLADAEGV TRFTTVPLDP VKSQDAGDTP TLGLSPDAFR IEGIGLNLAM NANGTRIYAA AADQPETLPE RGVVAVIDIA EEDCGAHFLQ ALEGCRFCGD GAHRVVLGHV AGYRWPGPDA DLPVIHDRAE AREGELFLDN LTHRPLVPSA ATLRQVVDCI LEQGVAEGPP GPRGDPGAPG SKGDRGEPGE RGEAGPKGDT GDRGPRGQDG RDGADGAGLL PGVPIVALSW RHAEPFPGGL GGLSEQVKGP GLAIAFKGKV LWPAFTGQTK AGPSVVAELE IPVEDDHGLI HWARPRMIAH PIENLQIAGD LLEGWDVLDE AEEVEGFCLR ADDNTHFDLR LDLRLPFRVV FHADFVTDPD GIAVSGAFIG GRLPTGSAGG GGTFRSWFHV REER
|
| |