Gene Noc_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1862 
Symbol 
ID3705126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2116794 
End bp2117750 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content44% 
IMG OID637738341 
Producthypothetical protein 
Protein accessionYP_343858 
Protein GI77165333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTT TTGACGAGAC AAGATACCTT GAACGTTTGC AATTTTTTAA TGGGCAGCGA 
CTGCTCGCCT CAGATCTGCA GGGTATAGAA ACATTTAACC GAGAAATGCG TTGGCTGCAC
AATAAGAGTT TGCACCAGCC GGGCATAGGA AGTGGTTTTG CTATTTACGG CAAGAAAGGG
AATCGCAAAG TTACTATAAA TCCAGGCTAT GCTATCGACG CATTAGGGCG TGAAATCGTC
TTGACCCAAA GCCAGGAAGA GCCAATTCCC CCAATATCGG CGGAGGGCGA CGGCAAATCA
GTATTTTATG ATCTTACTGT ATCTTATCCC GATAATTCGG GACTGGAAGA AACCGAAACG
CGCGAAGGCA TCTGCCTGCC GCGCGGTGTG GTTAGATTAC AGGAAGCACC CGTATTCTGC
TGGGTGCGAT TGCAGAGAGA TGGGCAAGAG AACTTGCGAG TAAAGAACTC TAAAATAAAA
GAGGACATTA AGAACGGGCT GAAAATTGTG CTTGCCCGAA TTGAGGTCTT TAACTGTCAG
TTGAAGCAAG ATCCTTCTAT CGCCCAACGG CGTAATGCAC GGCCTGCTAA GCAACCTTAC
ATTGCCTGTG GACAGGTTTT ACCTGAATGG GAGTTTCCTG ACAGTCAGAA CCAACAGGAA
CAATTCCCTT TAAAGCTCAA AGCAACAATC GAGACTACCA AAGCTGGATT CCTTATTCCC
CCATGCTATT CAGCACGCAT TGAGGGATCT AGAACAGTCG AGATAAAAAC AAATAAATCA
CCACCCGATA CAACCTTATT TCTTGTTGAA TTTATGCATA TTGAAGAGAG GAAAGCTGAG
GAGTTTACAG TCGAAGATTT TGTTTGTATA TCTGGAATAC AACAAGAGCA TGAAGAGAAA
GTAAAAGATC ATATTAGATC TAATTGGAAT ATTGTTTGGA TGGGCGTTGA GGGTTAG
 
Protein sequence
MAIFDETRYL ERLQFFNGQR LLASDLQGIE TFNREMRWLH NKSLHQPGIG SGFAIYGKKG 
NRKVTINPGY AIDALGREIV LTQSQEEPIP PISAEGDGKS VFYDLTVSYP DNSGLEETET
REGICLPRGV VRLQEAPVFC WVRLQRDGQE NLRVKNSKIK EDIKNGLKIV LARIEVFNCQ
LKQDPSIAQR RNARPAKQPY IACGQVLPEW EFPDSQNQQE QFPLKLKATI ETTKAGFLIP
PCYSARIEGS RTVEIKTNKS PPDTTLFLVE FMHIEERKAE EFTVEDFVCI SGIQQEHEEK
VKDHIRSNWN IVWMGVEG