8 homologs were found in PanDaTox collection
for query gene Nham_4543 on replicon NC_007961
Organism: Nitrobacter hamburgensis X14



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007961  Nham_4543  conjugal transfer protein TraH  100 
 
 		 207 aa  414  9.999999999999999e-116  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007959  Nham_4305  conjugal transfer protein TraH  92.27 
 
 		 207 aa  385  1e-106  Nitrobacter hamburgensis X14  Bacteria  normal  0.670535  n/a   
 
 
-
 
NC_011982  Avi_8135  conjugal transfer protein TraH  55.87 
 
 		 209 aa  222  3e-57  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011981  Avi_7067  conjugal transfer protein TraH  53.85 
 
 		 216 aa  213  9.999999999999999e-55  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012853  Rleg_5511  conjugal transfer protein TraH  52.66 
 
 		 203 aa  205  4e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.0167812 
 
 
-
 
NC_011984  Avi_9193  conjugal transfer protein TraH  55.14 
 
 		 208 aa  199  3e-50  Agrobacterium vitis S4  Bacteria  normal  0.19539  n/a   
 
 
-
 
NC_011991  Avi_9599  conjugal transfer protein TraH  48.26 
 
 		 211 aa  196  2.0000000000000003e-49  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010627  Bphy_7537  lytic transglycosylase catalytic  28.17 
 
 		 217 aa  48.5  0.00007  Burkholderia phymatum STM815  Bacteria  normal  0.75484  normal  0.0515023 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>