32 homologs were found in PanDaTox collection
for query gene Namu_3272 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_3272  putative acyl-CoA dehydrogenase-related protein  100 
 
 
396 aa  743    Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00000123433  hitchhiker  0.0000576183 
 
 
-
 
NC_014151  Cfla_0512  hypothetical protein  56.67 
 
 
338 aa  282  6.000000000000001e-75  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0189199  decreased coverage  0.000000311595 
 
 
-
 
NC_008541  Arth_0335  hypothetical protein  49.25 
 
 
341 aa  275  1.0000000000000001e-72  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_20110  hypothetical protein  46.97 
 
 
382 aa  265  1e-69  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.252423  normal  0.481515 
 
 
-
 
NC_011886  Achl_0555  hypothetical protein  50.62 
 
 
350 aa  246  4.9999999999999997e-64  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013441  Gbro_0202  hypothetical protein  46.18 
 
 
333 aa  205  1e-51  Gordonia bronchialis DSM 43247  Bacteria  normal  0.499323  n/a   
 
 
-
 
NC_012803  Mlut_01080  hypothetical protein  44.73 
 
 
372 aa  195  1e-48  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5871  putative acyl-CoA dehydrogenase-related protein  40.44 
 
 
363 aa  187  3e-46  Delftia acidovorans SPH-1  Bacteria  normal  0.845489  normal  0.406047 
 
 
-
 
NC_009512  Pput_2502  hypothetical protein  42.14 
 
 
347 aa  178  2e-43  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3259  acyl-CoA dehydrogenase-related protein  41.81 
 
 
347 aa  176  5e-43  Pseudomonas putida KT2440  Bacteria  normal  0.543921  normal 
 
 
-
 
NC_010501  PputW619_2652  acyl-CoA dehydrogenase  42.28 
 
 
347 aa  171  3e-41  Pseudomonas putida W619  Bacteria  normal  0.530272  normal  0.685897 
 
 
-
 
NC_007492  Pfl01_2543  hypothetical protein  41.45 
 
 
332 aa  168  1e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.730703 
 
 
-
 
NC_010623  Bphy_5416  putative acyl-CoA dehydrogenase-related protein  42.52 
 
 
388 aa  167  2e-40  Burkholderia phymatum STM815  Bacteria  normal  normal  0.699876 
 
 
-
 
NC_010322  PputGB1_2636  acyl-CoA dehydrogenase  40.47 
 
 
347 aa  166  5e-40  Pseudomonas putida GB-1  Bacteria  normal  0.292935  normal  0.528602 
 
 
-
 
NC_007005  Psyr_2998  hypothetical protein  40.13 
 
 
337 aa  164  2.0000000000000002e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3131  hypothetical protein  38.41 
 
 
337 aa  163  6e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470644  n/a   
 
 
-
 
NC_009338  Mflv_0021  dehydrogenase  49.5 
 
 
313 aa  159  9e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0755375  normal 
 
 
-
 
NC_007348  Reut_B4937  acyl-CoA dehydrogenase-related protein  40.58 
 
 
334 aa  157  3e-37  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2027  putative acyl-CoA dehydrogenase-related protein  41.23 
 
 
335 aa  150  3e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2567  putative acyl-CoA dehydrogenase-related protein  42.33 
 
 
359 aa  145  1e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752192  n/a   
 
 
-
 
NC_007969  Pcryo_1801  putative acyl-CoA dehydrogenase-related protein  33.9 
 
 
362 aa  135  1.9999999999999998e-30  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.162926 
 
 
-
 
NC_010681  Bphyt_2240  putative acyl-CoA dehydrogenase-related protein  39.48 
 
 
392 aa  133  5e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2922  Acyl-CoA dehydrogenase type 2 domain protein  24.11 
 
 
391 aa  58.9  0.0000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0575  Acyl-CoA dehydrogenase  27.76 
 
 
322 aa  57  0.0000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1346  hypothetical protein  28.95 
 
 
364 aa  56.2  0.0000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0806475  n/a   
 
 
-
 
NC_010172  Mext_3848  acyl-CoA dehydrogenase type 2  32.8 
 
 
391 aa  49.7  0.00008  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.680066 
 
 
-
 
NC_010725  Mpop_0138  cyclic nucleotide-binding protein  27.15 
 
 
382 aa  47.8  0.0003  Methylobacterium populi BJ001  Bacteria  normal  0.363055  normal  0.0562136 
 
 
-
 
NC_010505  Mrad2831_3329  acyl-CoA dehydrogenase type 2  29.41 
 
 
382 aa  47.4  0.0005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.684525  normal 
 
 
-
 
NC_011757  Mchl_4157  Acyl-CoA dehydrogenase type 2 domain  31.03 
 
 
391 aa  47  0.0006  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0737881  normal 
 
 
-
 
NC_013922  Nmag_2124  acyl-CoA dehydrogenase domain protein  27.42 
 
 
388 aa  43.9  0.005  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_0010  acyl-CoA dehydrogenase domain protein  29.91 
 
 
388 aa  43.5  0.006  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008699  Noca_3727  acyl-CoA dehydrogenase domain-containing protein  37.21 
 
 
378 aa  43.1  0.01  Nocardioides sp. JS614  Bacteria  normal  0.0588386  n/a   
 
 
-
 
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