16 homologs were found in PanDaTox collection
for query gene Mpe_A0738 on replicon NC_008825
Organism: Methylibium petroleiphilum PM1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008825  Mpe_A0738  hypothetical protein  100 
 
 
330 aa  652    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.613681 
 
 
-
 
NC_010524  Lcho_2368  peptidyl-prolyl cis-trans isomerase  43.02 
 
 
299 aa  222  7e-57  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007404  Tbd_1798  hypothetical protein  39.13 
 
 
316 aa  182  8.000000000000001e-45  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.64046  normal 
 
 
-
 
NC_007614  Nmul_A0241  hypothetical protein  35.42 
 
 
330 aa  157  2e-37  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2027  hypothetical protein  28.89 
 
 
314 aa  133  5e-30  Methylobacillus flagellatus KT  Bacteria  normal  0.594988  normal 
 
 
-
 
NC_009511  Swit_2167  hypothetical protein  30.77 
 
 
288 aa  65.1  0.000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.013575  normal  0.123281 
 
 
-
 
NC_008609  Ppro_3588  PpiC-type peptidyl-prolyl cis-trans isomerase  23.64 
 
 
300 aa  60.1  0.00000005  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000000961276  n/a   
 
 
-
 
NC_009485  BBta_1019  hypothetical protein  27.89 
 
 
269 aa  53.9  0.000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.679888  normal 
 
 
-
 
NC_007517  Gmet_3548  PpiC-type peptidyl-prolyl cis-trans isomerase  24.13 
 
 
323 aa  52.8  0.000009  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.0000000000137747  normal 
 
 
-
 
NC_009483  Gura_0141  PpiC-type peptidyl-prolyl cis-trans isomerase  25.37 
 
 
310 aa  52  0.00001  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.000000000469336  n/a   
 
 
-
 
NC_002939  GSU0016  peptidyl-prolyl cis-trans isomerase domain-containing protein  22.61 
 
 
313 aa  47.4  0.0003  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.000161985  n/a   
 
 
-
 
NC_009511  Swit_2370  hypothetical protein  25.64 
 
 
286 aa  46.2  0.0008  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1094  PpiC-type peptidyl-prolyl cis-trans isomerase  25.67 
 
 
296 aa  44.7  0.002  Burkholderia sp. 383  Bacteria  normal  normal  0.250867 
 
 
-
 
NC_007614  Nmul_A2114  PpiC-type peptidyl-prolyl cis-trans isomerase  27.03 
 
 
265 aa  45.1  0.002  Nitrosospira multiformis ATCC 25196  Bacteria  unclonable  0.000000109897  n/a   
 
 
-
 
NC_010814  Glov_0699  PpiC-type peptidyl-prolyl cis-trans isomerase  19.78 
 
 
305 aa  44.3  0.003  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000032571  n/a   
 
 
-
 
NC_012918  GM21_0198  PpiC-type peptidyl-prolyl cis-trans isomerase  23.36 
 
 
336 aa  44.3  0.003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000154337 
 
 
-
 
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