12 homologs were found in PanDaTox collection
for query gene MADE_00978 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_00978  hypothetical protein  100 
 
 
262 aa  545  1e-154  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0607  hypothetical protein  37.05 
 
 
225 aa  164  1.0000000000000001e-39  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.525552  n/a   
 
 
-
 
NC_010803  Clim_1959  hypothetical protein  41.63 
 
 
237 aa  160  2e-38  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00110693  n/a   
 
 
-
 
NC_008817  P9515_04071  hypothetical protein  38.96 
 
 
266 aa  155  6e-37  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4251  Methyltransferase type 11  32.9 
 
 
275 aa  57.8  0.0000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_2743  methyltransferase type 12  25.58 
 
 
290 aa  55.8  0.0000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2675  hypothetical protein  26.16 
 
 
289 aa  54.3  0.000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011680  PHATRDRAFT_47187  predicted protein  28.75 
 
 
362 aa  52.8  0.000006  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_008312  Tery_0025  hypothetical protein  43.1 
 
 
141 aa  45.8  0.0007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009135  MmarC5_1000  ribosomal RNA methyltransferase RrmJ/FtsJ  35.21 
 
 
258 aa  43.1  0.005  Methanococcus maripaludis C5  Archaea  normal  0.260962  n/a   
 
 
-
 
NC_009637  MmarC7_1628  ribosomal RNA methyltransferase RrmJ/FtsJ  35.21 
 
 
258 aa  42.7  0.005  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009975  MmarC6_0286  ribosomal RNA methyltransferase RrmJ/FtsJ  35.21 
 
 
258 aa  42.7  0.005  Methanococcus maripaludis C6  Archaea  normal  0.210979  n/a   
 
 
-
 
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