Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47187 |
Symbol | |
ID | 7201963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 748196 |
End bp | 749442 |
Gene Length | 1247 bp |
Protein Length | 362 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181436 |
Protein GI | 219122194 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGGTC GTAGCAAAAG ACCCTCGGGT GGACGTATGC TACGCATCAT TGCTGCGGTG CTAGTACTGT GCTTATGGGC CTTTAAATTT CCCATATTGT TCGATGAGTC GATTGACCGA GCAAAGGATT CTCCGGCAAC GCACAGTTCC TCAGGGAATA ACTGGGACTT TCTGACGTTG CCGCAGACAC CTTTGGCAGC AAACCAAAAC CTGATACAGA TCGAATTTGA TTGGATCAAT GCACGTTTGC TCGGACCCGA CTCTTACGGT GGAACCGATA AATGCAGTCT TTGTGGGTGT CCTGGCGTTC CAACCCCTCG AGACTGCCCG CAGTGGTACA CAGTGGAGGA CATCCAAGAC TCCGTACACT TTATGGATGA TCACAGCGAT GTGCTTATTC CGCACTCACG TGCTTTGTTG AACAAAAGAC GATTAGAGGC GGAAGGCGAC TGTCAGGTGA AGGAGGTTAC TCAAGCCCGA GGTGGATGGT GTCTTACACC AAATCCTAAA GGGGAAAAAA TGACTACGGC TAATGGCAGC TTTCTTGTAC CATTCCATCA TGTTCCTCCA GCAAAGCGTC TCGTCGATGA AATTGACAAG CTGATTCGAG ACGAAGACGT AAGATCAATA GTCGACTTTG GTGCAGGTGT AGGACAGTAC AAGTTGGCCT TGACCGAGCG GCATCCTGAT CTACAGTACT ATGCGTATGA TGGGGCTGGT AATGCTGTTA ATTATACCAA CGACTACCTG GAATACTTTG ATCTGACCAT TCCTTTGGGA CTACCCAAGG CGGATTGGGT TTTGTCACTT GAGGTGGGAG AGCATGTGCC TAGTAAATAC GAAGGTATGG TCCTACGGAA TCTGCATCGA CACAATTGCA AAGGAATAAT ATTGAGTTGG GGTGTTCTTG GCCAAGGAGG ATATGGCCAT GTCAACAACC ACTCCAATGA TTATATCATC AAAGTGATTG AACAGCTTGG ATATGTTCTA GACCAAAAAT TGACTGCACG ATTCCAGCAA GCCAAGGATA ATTACTGGTG GTTCAAAAAA TCAACCATGG CCTTTCGACG TACGACTGAA GTCTGTTAGT GTACCCGCTG GCTGCGTTGA AAAAGAGTGC TGCTTCGGTT TTTCAAAATA CGATTTGATG ACATTTGGTG ACTGGATCCC GGCTTGGTTG GATGCGATGG CACGGTGATA GAAAAATTGA AGAGAACGGT TTTCTATAAA CTCAATTGCA CTTATTT
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Protein sequence | MGGRSKRPSG GRMLRIIAAV LVLCLWAFKF PILFDESIDR AKDSPATHSS SGNNWDFLTL PQTPLAANQN LIQIEFDWIN ARLLGPDSYG GTDKCSLCGC PGVPTPRDCP QWYTVEDIQD SVHFMDDHSD VLIPHSRALL NKRRLEAEGD CQVKEVTQAR GGWCLTPNPK GEKMTTANGS FLVPFHHVPP AKRLVDEIDK LIRDEDVRSI VDFGAGVGQY KLALTERHPD LQYYAYDGAG NAVNYTNDYL EYFDLTIPLG LPKADWVLSL EVGEHVPSKY EGMVLRNLHR HNCKGIILSW GVLGQGGYGH VNNHSNDYII KVIEQLGYVL DQKLTARFQQ AKDNYWWFKK STMAFRRTTE VC
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