| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1628 |
|---|
| Symbol | |
|---|
| ID | 5327832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1578891 |
|---|
| End bp | 1579667 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640794182 |
|---|
| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
|---|
| Protein accession | YP_001330837 |
|---|
| Protein GI | 150403543 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0293] 23S rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAA AGGACAAAAG ATGGGTTCTT CAAAGGAAAA ACGACCATTA TTACAATCTA
GCAAAAAAAA GAAATTACAG GTCAAGAGCA ACGTACAAAC TATTCCAGTT GAATGAAAAA
TTCAATTTAA TAAAGGAAAG AAACGTTGTT GTAGATTTAG GCTGTGCTCC AGGAGGATGG
CTTCAGGCTG CACGAGATAT TGTGGGAGAG AAAGGGTTTA TCGTTGGAAT TGATTTACAG
ACTGTAAAGC CACTACCTTA TGAAAATGTC ATTGCAATTA AAGGCGACAT GACAAAAGAA
GAAATTTTAA AACAGGCTAA GGACTTACTT CCAGAAAAAC CTGACGTTAT AATCTGCGAT
GCATCTCCAA ACATCAGCGG GGTATGGGAT GTAGACCATG CAAGGTCCCT TGAACTTACA
ACTATGGCAC TCATGACTGC AACAAAAATG TTAAAAAAAG GCGGAAATTT TGTTGTAAAA
GTATTTCAGG GCGATTTGTT CGAAAAATAC GTTCAGCTCG TTTCAGAATA CTTTGATAAA
GCATTTACGA CAAAACCAAG AGCTTCAAGA GACGAAAGTG CCGAAGTATA TGTGATTGGA
AAAAGATTTA ACGGCAGAAA ATTTGACATA AATTCAAAAT CGCCAATCGT AAAACTGCTT
GATACCAATC CAGAAGAAAA AGAAATTACG AGCCCAAGTT TAAGAAAAGA AATATCTAAA
GAAGATAGCG GACTCATGAT CAAAAGAATA AAGGAAATGA GATCCAAAAA AGAATAA
|
|---|
| Protein sequence | MGKKDKRWVL QRKNDHYYNL AKKRNYRSRA TYKLFQLNEK FNLIKERNVV VDLGCAPGGW
LQAARDIVGE KGFIVGIDLQ TVKPLPYENV IAIKGDMTKE EILKQAKDLL PEKPDVIICD
ASPNISGVWD VDHARSLELT TMALMTATKM LKKGGNFVVK VFQGDLFEKY VQLVSEYFDK
AFTTKPRASR DESAEVYVIG KRFNGRKFDI NSKSPIVKLL DTNPEEKEIT SPSLRKEISK
EDSGLMIKRI KEMRSKKE
|
|---|
| |