4 homologs were found in PanDaTox collection
for query gene Lcho_3003 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010524  Lcho_3003    100 
 
 		 10439 bp  20690    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008686  Pden_0560  hemolysin-type calcium-binding region  92.31 
 
 		 3240 bp  54  0.0008  Paracoccus denitrificans PD1222  Bacteria  normal  0.545421  normal  0.459398 
 
 
-
 
NC_012560  Avin_51170  Secreted mannuronan C-5 epimerase  88.24 
 
 		 5520 bp  54  0.0008  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_003296  RS05070  putative hemagglutinin/hemolysin-related protein  85.48 
 
 		 12321 bp  52  0.003  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
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