| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0560 |
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| Symbol | |
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| ID | 4579681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 532894 |
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| End bp | 536133 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639767878 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_914368 |
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| Protein GI | 119383312 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.545421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.459398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGA CGGGCCGGGC GCGCCAATTT CTTTTGACAT CGGCCGCGGG ATCGGCGCTA
TTCGGCGCAC ATATCTCTAT CAATTTACGC GAGAGACGGT TCATGGCGAC GATTACCGGA
ACGGACAATT CAGAAACCCT GCTGGGCACC GCCAATGCGG ATTTGATCAA CGGGCTGGGC
GGAAACGACA CGATCACCGG CGGCAGCGGC AATGACACGA TGCATGGCGG ATCGGGCGAC
GACACCTTCC TGATCGGCGG CACGGATATC GGCCACGATA TCTATGATGG CGGGGACGGG
GCGGATCAGA TCCGGCTGAA CGGCACCCTG AAGGTCTCGA ACCTGTCGCT GACCAGTGCC
AACGTGATCA GCACCGAGAC GCTGAACTTC TATGGCTACG GCGTCGAGGG CACCGGCGGC
AACGACGTGT TCGATATCAG CGGCATGACC TATGTGTCGG GCTATAGCCG CATCTACATG
TTCGACGGCA ACGATACCTT CACCGGCTAT GCCGGCAACG ACAATGTCGA TGGCGGTGCT
GGCAACGACG TGCTGAACGG CGGTGCGGGC AACGATACGC TGATCGGCGG GTCCGGCAAC
GACACGCTGA ACGGCGGCAG CGGCAACGAC TACTTCTATA TCGGCGGCAC CAATTTCGGC
CATGACGTCT ATAACGGCGG CGAGGGCTCG GACGAGATCC GGCTGGTCGG CAAGGTCACG
GTCTCGAACC TGTCGCTGAC CAGTGCCAAC GTGATCAGCA CCGAGACGCT GAATTTCTAT
GGCTACGGCG TCGAGGGCAC CGGCGGCAAC GACGTGTTCG ACATCAGCGG CATGACCTAT
GTGTCGGGCT ATAGCCGCAT CTACATGTTC GACGGCAACG ATACCTTCAC CGGCTATGCC
GGCAACGACA ATGTCGATGG CGGTGCTGGC AACGACGTGC TGAACGGCGG TGCGGGCAAC
GATACGCTGA TCGGCGGGTC CGGCAACGAC ACGCTGAACG GCGGCAGCGG CAACGACTAC
TTCTATATCG GCGGCACCGA TTTCGGCCAT GACGTCTATA ACGGCGGCGA GGGCTCGGAC
GAGATCCGGC TGGTCGGCAA GGTCACGGTC TCGAACCTGT CGCTGACCAG TGCCAACGTG
ATCGGCACCG AGACGCTGAA TTTCTATGGC TACGGCGTCG AGGGCACCGG CGGCAACGAC
GTGTTCGACA TCAGTGGCAT GACCTATGTG TCGGGCTATA GCCGCATCTA CATGTTCGAC
GGCAACGATA CCTTCACCGG CTATGCCGGC AACGACAACG TCGATGGCGG TGCTGGCAAC
GACGTGCTGA ACGGCGGTGC GGGCAACGAT ACGCTGATCG GCGGGTCCGG CAACGACACG
CTGAACGGCG GCAGCGGCAA CGACTACTTC TATATCGGCG GCACCGATTT CGGCCATGAC
GTCTATAACG GCGGCGAGGG CTCGGACGAG ATCCGGCTGG TCGGCAAGGT CACGGTCTCG
AACCTGTCGC TGACCAGTGC CAACGTGATC AGCACCGAGA CGCTGAATTT CTACGGCTAC
GGCATCGAAG GCACCGGCGG CAACGACGTG TTCGACATCA GCGGCATGAC CTATGTGTCG
GGCTATAGCC GCATCTACAT GCAGGACGGC AACGACCGCT TTACCGGCTA TGCCGGCAAC
GACAACGTCG ATGGCGGTGC TGGCAACGAT ACGCTGATCG GCGGTGCCGG CAATGACACG
CTGAACGGCG GCAGCGGGAT CGATACGGCG GCTTACGGCA GCGCGACGGC GGGCGTGACG
GTCAACCTGG CGCTGACGAC TGCGCAGGCC GTCGGCGGGG GCCAGGGCGT CGACACGCTG
ATCGACATCG AGAATGTCAA CGGCTCGGCC TATGCGGATG CCTTGCTCGG CAATGCCGCC
GCCAACCTGC TGCAAGGGGC GGGCGGCAAC GACACGCTGG ACGGCGGCGC CGGGAACGAT
ACGCTGTCGG GCGGCGCGGG CATGGATACG GCCGCCTATG GCCGCGCATC CTCGGGCGTG
ACGGTGAACC TTGGTCTTAC CGGCGCGCAA CTGGTCGGCG GCGGACAGGG CCGCGACGTG
CTGCGCAGCA TCGAGAATAT CGACGGCTCG GGCTTCGCCG ACCGGCTGAC CGGCAATGCC
GGGAGCAACG CCCTGCGCGG TGGTGCGGGC AACGACAGCC TGAGCGGGCT GGGCGGCAAT
GACCGCCTGT TCGGCGGCGC AGGCGCGGAC CAGCTTTTGG GCGGAGCAGG CAATGACGTG
CTGAATGGCG ATGCCGGCAA CGACCTGCTG AACGGCGGCG CCGGGAACGA CACGCTGAAC
GGCGGTGCGG GCATCGATAC CGCGGCTTAT GGCGGCGCGT CCTCGGGCGT GACGGTGAAC
CTTGGCCTGA CCGTTGCGCA ACTGATCGGC GGCGGGCAGG GCCGCGACGT GCTGCGCAAC
ATCGAGAACG TCAACGGTTC GGGCTTCGCG GATCGGCTGA CCGGCAATAC CGGGAACAAC
GTCCTGAACG GCGCTGCCGG CAACGACACG CTGTCGGGCG GAGCCGGCAG GGACCAGTTG
CTTGGCGGCG CGGGCGCAGA CCAGCTTCTT GGCGGTGCCG GCAACGACAC GCTGAACGGC
GGCGCCGGGA ACGACACGCT GAACGGCGGT GCGGGGATCG ATACCGCGGC TTACGGCGGC
GCGTCCTCGG GCGTGACGGT GAACCTTGGC CTGACCGTTG CGCAACTGAT CGGCGGCGGG
CAGGGCCGCG ACGTGCTGCG CAACATCGAG AACGTCAACG GTTCGGGCTT CGCCGACCGG
CTGACCGGCA ATGCCGGGAA CAACGTCCTG AACGGCGCTG CCGGCAACGA CACGCTGTCG
GGCGGAGCCG GCAGAGACCA GTTGTCTGGC GGTGCGGGCG CGGACCGGCT TCTTGGCGGC
GCCGGCAACG ACACGCTGAA CGGTGGTGCG GGGAACGACA CGCTGACGGG CGGCGTCGGG
GCCGATGTCT TCGTGTTCGC CGTCGGCAAT GGCGCGGACC GGATCACCGA CTGGCAGGAC
GGTACGGATG TGATCCGCAT CGTCTCGGGC AACTGGCAGG GCGAGCGTTA CGACAGCTTC
GACGACCTGA GCATCACCCA GTCGGCCGGC AATGCGGTGG TCAGCTTCGG CGGCACCACG
ATCACGCTGG CCGGGATCGG CAGCGGCCAG CTCGACGCCT CGGATTTCAT CTTCGTCTGA
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| Protein sequence | MAQTGRARQF LLTSAAGSAL FGAHISINLR ERRFMATITG TDNSETLLGT ANADLINGLG
GNDTITGGSG NDTMHGGSGD DTFLIGGTDI GHDIYDGGDG ADQIRLNGTL KVSNLSLTSA
NVISTETLNF YGYGVEGTGG NDVFDISGMT YVSGYSRIYM FDGNDTFTGY AGNDNVDGGA
GNDVLNGGAG NDTLIGGSGN DTLNGGSGND YFYIGGTNFG HDVYNGGEGS DEIRLVGKVT
VSNLSLTSAN VISTETLNFY GYGVEGTGGN DVFDISGMTY VSGYSRIYMF DGNDTFTGYA
GNDNVDGGAG NDVLNGGAGN DTLIGGSGND TLNGGSGNDY FYIGGTDFGH DVYNGGEGSD
EIRLVGKVTV SNLSLTSANV IGTETLNFYG YGVEGTGGND VFDISGMTYV SGYSRIYMFD
GNDTFTGYAG NDNVDGGAGN DVLNGGAGND TLIGGSGNDT LNGGSGNDYF YIGGTDFGHD
VYNGGEGSDE IRLVGKVTVS NLSLTSANVI STETLNFYGY GIEGTGGNDV FDISGMTYVS
GYSRIYMQDG NDRFTGYAGN DNVDGGAGND TLIGGAGNDT LNGGSGIDTA AYGSATAGVT
VNLALTTAQA VGGGQGVDTL IDIENVNGSA YADALLGNAA ANLLQGAGGN DTLDGGAGND
TLSGGAGMDT AAYGRASSGV TVNLGLTGAQ LVGGGQGRDV LRSIENIDGS GFADRLTGNA
GSNALRGGAG NDSLSGLGGN DRLFGGAGAD QLLGGAGNDV LNGDAGNDLL NGGAGNDTLN
GGAGIDTAAY GGASSGVTVN LGLTVAQLIG GGQGRDVLRN IENVNGSGFA DRLTGNTGNN
VLNGAAGNDT LSGGAGRDQL LGGAGADQLL GGAGNDTLNG GAGNDTLNGG AGIDTAAYGG
ASSGVTVNLG LTVAQLIGGG QGRDVLRNIE NVNGSGFADR LTGNAGNNVL NGAAGNDTLS
GGAGRDQLSG GAGADRLLGG AGNDTLNGGA GNDTLTGGVG ADVFVFAVGN GADRITDWQD
GTDVIRIVSG NWQGERYDSF DDLSITQSAG NAVVSFGGTT ITLAGIGSGQ LDASDFIFV
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