Gene Avin_51170 details

Gene Information

• Locus tag: Avin_51170
• Symbol: algE3
• ID: 7763962
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 5185271
• End bp: 5190790
• Gene Length: 5520 bp
• Protein Length: 1839 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643807942
• Product: Secreted mannuronan C-5 epimerase
• Protein accession: YP_002802176
• Protein GI: 226947103
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG5434] Endopolygalacturonase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTTCA ACGTCAAAGA TTTCGGGGCA CTGGGCGATG GCGCCAGCGA TGACACGGCG 
GCCATCCAGG CGGCGATCGA CGCCGCCCAC GCGGCGGGCG GCGGCACCGT CTACCTGCCG 
GCCGGCGAGT ATCGGGTCAG CGGCGGCGAG GAGCCTTCCG ACGGCGCGCT GACCATCAAG 
AGCAACGTCT ATATCGTCGG CGCCGGGATG GGCGAGACGG TGATCAAGAT GGTCGACGGC 
TGGACGCAGA ACGTCACCGG CATGGTGCGC TCGGCCTATG GCGAGGAGAC CAGCAACTTC 
GGCATGAGCG ACCTGACCCT CGACGGCAAC CGCGACAACC TGTCCGCCAA GGTCGACGGC 
TGGTTCAACG GCTACATTCC CGGCCAGGAC GGTGCCGATC GCGACGTGAC CCTGGAGCGG 
GTGGAAATCC GCGAAATGTC CGGTTACGGT TTCGATCCGC ACGAGCAGAC CATCAACCTG 
ACGATCCGCG ACAGCGTGGC CCACGACAAC GGCCTCGACG GCTTCGTCGC CGACTACCAG 
ATCGGCGGGG TGTTCGAGAA CAACGTCTCG TACAACAACG ACCGCCACGG CTTCAACATC 
GTCACCAGCA CCAACGACTT CGTCCTGAGC AACAACGTCG CCTACGGCAA CGGCGGCGCC 
GGCCTGGTGG TGCAGCGCGG CTCGTACGAC CTGCCCCATC CCTACGACAT CCTGATCGAC 
GGCGGCGCCT ACTACGACAA CGCCTTGGAA GGCGTGCAGC TCAAGATGAC CCACGACGTC 
ACCCTGCAGA ACGCCGAGAT CTATGGCAAC GGCCTGTACG GAGTGCGCGT CTACGGCGCC 
CAGGACGTGC AGCTCCTCAA TAACCAGATC CACGACAATT CGCAGAACGG CGCCTATGCC 
GAAGTCCTGC TGCAGTCCTA CGACGACACC GCCGGGGTGT CCGGCAACTT TTACGTCACC 
ACCGGCACCT GGCTCGAAGG CAACGTCATC AGCGGCTCGG CCAATTCCAC CTTCGGCATC 
CAGGAGCGCG CCGACGGCAC CGACTACAGC AGCCTTTACG CCAATACCAT CGACGGCGTG 
CAGAACGGGA CGGTACGGCT GTATGGCGCC AACTCCACGG TTTCCGAGCA GCCCAGCAGC 
AGCCAGCAGG AAACCCTCGA AGGCACCGCG GGCAACGACG TGCTCAGCGG AACGGGCGCC 
CACGAACTGA TTCTCGGCCT GGCCGGCAAC GATCGCCTGG ACGGTGGCGC CGGCGACGAC 
ACCCTCGACG GCGGCGCGGG GCGCGATACC CTGACCGGCG GCGCGGGCGC CGATACCTTC 
CGCTTCTCTG CCCGCGAGGA CAGTCACCGC ACCGACAGCG CCAGCTTCAC CGACCTGATC 
ACCGACTTCG ACGCCAGCCA GGACCGCATC GACCTCTCCG CACTGGGCTT CACCGGTCTG 
GGCAACGGTT ATGACGGCAC CCTGGCGGTG ACCACCGGTT CCGGCGGCAC CCGCACCTAC 
CTGAAGAGCT ACGAGGTGGA CGCCCAGGGC CGGCGTTTCG AAATCGCCCT GGACGGCAAC 
TTCGTCGGCC AGTTCAACGA TGGCAACCTA TTGTTCGACG CCGCTCCGGT CACCGGTACC 
GAGGGCAACG ACAACCTGTC CGGCACCGAT GCCGGGGAAA CCCTCCTGGG CTACGGCGGC 
AACGACACCC TCAACGGCGG GGCCGGCAAC GACATCCTGG TCGGCGGCGC CGGGCGCGAC 
ACCCTGACCG GCGGCGCCGG GGCGGACGTG TTCCGCTTCG AGGCGCTGTC CGACAGCCAG 
CGCAACTACA CCGCCGGCGA CAACCAGGGC GATTACATCA TCGACTTCGC CGTGGGCGAA 
GACAGGATCG ACGTATCGGC GCTGGGTTAC ACCGGGCTGG GCAACGGCCG CAACGGCACC 
CTCGCCGTGG TGCTCAACAG CGCCGGCGAC CGCACCTACG TGAAGAGCTA CGACACTGAC 
GCCAACGGCT ATAACTTCGA GCTTTCCCTC GCGGGCAACT ACCAGGGGCT GCTCGGCGCC 
GAACAGTTCG TCTTCGCCAC GCCCCCGGAA CAGGCGACCA TCGAGGGAAC CGACGGCAAC 
GACACCTTGC AAGGGACTGG GGCCGACGAA CTGCTCCTCG GTCTGGGCGG CCGGGACAGC 
CTGAACGGCG GCGCCGGCGA CGATGTCCTG GATGGCGGGG CGGAGCGCGA CACCCTGACC 
GGCGGCACGG GGGCCGACAC CTTCCTGTTC TCCGCGCGTA CCGACAGCTA CCGCACCGAC 
AGCGCCAGCT TCACCGACCT GATCACCGAC TTCGATCCCG CCCAGGATCG CATCGACCTG 
TCCGGCCTGG GCTTCAGCGG TTTCGGCAAC GGCTACGACG GCACCCTGCT GCTGCAGGTC 
AACGCCGCGG GCACCCGCAC CTACCTGAAG AGCCTCGAGG CCGATGCCGA CGGCCAGCGC 
TTCGAGATCG CCCTGGACGG CGACTTCAGC GGCCAGTTGG ACAGCGGCAA CGTGATCTTC 
GAGGCCGGCG TGTTCAATGC CAAGGACTTC GGCGCGCTGG GCGACGGCGC CAGCGACGAC 
CGGCCGGCCA TCCAGGCGGC GATCGACGCC GCCTACGCGG CCGGCGGCGG CACCGTCTAC 
CTGCCGGCCG GCGAGTACCG GGTCAGTCCC ACCGGGGACC CGGGCGACGG CTGCCTGATG 
CTCAAGGACG GCGTCTACCT GGTCGGCGCC GGCATGGGCG AAACGGTGAT CAAGCTGATC 
GACGGCTCCG ACCAGAAGAT CACCGGCATG GTGCGCTCGG CCTATGGCGA AGAGACCAGC 
AACTTCGGCA TGAGCGACCT GACCCTCGAC GGCAACCGCG ACAACACCAG CGGCAAGGTC 
GACGGCTGGT TCAACGGCTA CATCCCCGGC CAGGACGGCG CCGACCGCAA CGTGACCATC 
GAGCGGGTAG AAATCCGCGA AATGTCCGGC TACGGCTTCG ATCCGCACGA ACAGACCATC 
AATCTGACGA TCCGCGACAG CGTGGCCCAC GACAACGGCC TCGACGGCTT CGTCGCCGAC 
TACCTGGTCG ACAGCGTGTT CGAGAACAAC GTCGCCTACA ACAACGACCG CCACGGCTTC 
AACGTGGTCA CCAGCACCTA CGACTTCACC CTGAGCAACA ACGTCGCCTA CGGCAACGGC 
GGCGCCGGCC TGGTGATCCA GCGGGGAGCG GAGGACCTGG CCCAGCCGAC CGATATCCTG 
ATCGACGGCG GCGCCTACTA CGACAACGCC CTGGAAGGCG TGCTGCTGAA GATGACCAAC 
AACATCACCC TGCAGAACGC CGAGATCTAC GGCAACGGTT ACTCCGGCGT GCGCCTGTAC 
GGCACGGAGG ACGTGCAGAT CCTCAACAAC CAGATCCACG ACAACGCGCA GAACGTCGCC 
TATGCCGAAG TCCTGCTGCA GTCCTTCAAC GACGTCGGGG TGTCCGGCAA CTTCTACGCC 
ACCACCGGCA CCTGGATCGA AGGCAACGTC ATCAGCGGCT CGGCCAACTC CACCTATGGC 
ATCGAGGAGC GCAACGACGG CACCGATTAC AGCAGCCTCT ACGCCAACAC CATCGACGGT 
GTGCAGACCG GGGCGGTACG GCTGAATGGC GCCCATTCGA TCGTCTCCGA CCAGCCCGGC 
ACCGGCCAGC AGGCGACCCT CGAAGGCACG ACCGGCAATG ATACGCTCGG CGGCAGCGAC 
GCCCACGAGA CGCTGCTCGG TCTGGACGGC GACGATCGCC TGGACGGCGG CGCCGGCAAC 
GACATCCTCG ACGGCGGCGT CGGGCGCGAC ACGCTGACCG GCGGCGCGGG CGCCGACACC 
TTCCGCTTCT CCGCCCGCGA GGACAGCTAC CGCACCGCCA GCACCAGCTT CACCGACCTG 
ATCACCGACT TCGATCCCGC CCAGGACCGC ATCGACCTGT CCGCGCTGGG CTTCACCGGC 
CTGGGCGACG GCTATGACGG CACCCTGCTG GTGACCACCG GTTCCGGCGG TAGCCGCACC 
TACCTGAAGA GCCTGGAGGC GGACGCCGAG GGGCGGCGCT TCGAGATCGC CCTGGACGGC 
GACTTCGTCG GCCTGCTCGA TGCCAGCAAC CTGATTTTCG AGCGTCCCGC CATCGAGGGG 
GATGCCGGCA ACAACGCCCT GCTCGGCACC TCGGTCGCCG AGACATTGCT CGGCCATGCC 
GGCAACGACA CGCTCGACGG CGCCGGCGGC GACGACATCC TGGTCGGCGG CGCGGGGAGC 
GACAGCCTCA CCGGCGGCGC CGGAGCCGAC GTGTTCCGCT TCGACGCGCT GTCCGACAGC 
CAGCGCAACT ACGACACCGG CGACAACCAG GGCGATCGCA TCACCGACTT CGCGGTGGGC 
GAAGACAAGC TCGACGTGTC GGCGCTGGGC TTCACCGGGC TGGGCGACGG CTACAACGGC 
ACTCTCGTCC TGGTGCTCAA CAGCGCCGGC GACCGCACCT ACGTGAAGAG CTACGAGAAC 
GGCGCCGACG GCTATCGCTT CGAGTTTTCC CTCGACGGCA ACTACCAGGG ACTGCTCGGC 
AACGAGGATT TCATCTTCGC CACGCCCAGC GGCCAGCAGC TCCTCGAAGG CACCGCCGGC 
AACGACAGCC TGCAGGGCAC GGCCGCCGAC GAGGTGATCC ACGGCGGCAG CGGGCGCGAC 
ACGCTGGCCG GCGGGGCCGG GGCCGACGTG TTCCGCTTCA GCGAACTGAC CGACAGCTAC 
CGGACCGACA GTGCCAGCTA TGCCGATCTG ATCACCGACT TCGATGCCAG CGAGGATCGC 
ATCGACCTGT CCGGGCTCGG CTTCAGCGGT CTGGGCAACG GCTACGGCGG CACCCTGGCG 
CTGCAGGTGA ACAGCGCCGG CACCCGCACC TACCTGAAGA GCTACGAGGC GAACGCCGCC 
GGCGAGCGCT TCGAGCTTTC CCTGGACGGC GACCTGTCCG GGCTCGACGA GTCCTACCTC 
GTTTTCGACG AGCGCGTCGT GCTGGCGGGC GGCGATGGCA ACGACACGCT TTCCGGCGGC 
AGCGCGGCCG AGGAACTGCT CGGCGGTGCC GGCAACGACA GCCTGAGCGG CGGTGCCGGC 
AACGATATCC TCGACGGCGG CGCCGGGCGC GACACCCTGA GCGGCGGCAG CGGCAGCGAC 
ATCTTCCGCT TCGGCGACGC GCTCGACAGC TTCCGCAACT ACAACAGCGG GGCGAACGTC 
ACCGACAGCA TCGCCGACTT CACCCACGGC GCCGATCTGA TCGACCTCTC CGCGCTCGGC 
TACACCGGGC TGGGCGACGG CTACAACGGC ACCCTGGCGA TAGTGCTGAA CGACGCCGGC 
ACCAAGACCT ACCTCAAGGA CCGTGGCGGC GACGCCGAAG GCAACCGTTT CGAGATCTCC 
CTGGAGGGCA ACCACGCCGA CCAGCTCGAT GCGAGCGACT TCATCTTCGC CACGGCGGCC 
GCGGCCACCG GAATCGAGGT GGTCGGCAGC ACGCCGGCCG AGGAGCAGCC GGTCGTCTGA 

 

Protein sequence

MDFNVKDFGA LGDGASDDTA AIQAAIDAAH AAGGGTVYLP AGEYRVSGGE EPSDGALTIK 
SNVYIVGAGM GETVIKMVDG WTQNVTGMVR SAYGEETSNF GMSDLTLDGN RDNLSAKVDG 
WFNGYIPGQD GADRDVTLER VEIREMSGYG FDPHEQTINL TIRDSVAHDN GLDGFVADYQ 
IGGVFENNVS YNNDRHGFNI VTSTNDFVLS NNVAYGNGGA GLVVQRGSYD LPHPYDILID 
GGAYYDNALE GVQLKMTHDV TLQNAEIYGN GLYGVRVYGA QDVQLLNNQI HDNSQNGAYA 
EVLLQSYDDT AGVSGNFYVT TGTWLEGNVI SGSANSTFGI QERADGTDYS SLYANTIDGV 
QNGTVRLYGA NSTVSEQPSS SQQETLEGTA GNDVLSGTGA HELILGLAGN DRLDGGAGDD 
TLDGGAGRDT LTGGAGADTF RFSAREDSHR TDSASFTDLI TDFDASQDRI DLSALGFTGL 
GNGYDGTLAV TTGSGGTRTY LKSYEVDAQG RRFEIALDGN FVGQFNDGNL LFDAAPVTGT 
EGNDNLSGTD AGETLLGYGG NDTLNGGAGN DILVGGAGRD TLTGGAGADV FRFEALSDSQ 
RNYTAGDNQG DYIIDFAVGE DRIDVSALGY TGLGNGRNGT LAVVLNSAGD RTYVKSYDTD 
ANGYNFELSL AGNYQGLLGA EQFVFATPPE QATIEGTDGN DTLQGTGADE LLLGLGGRDS 
LNGGAGDDVL DGGAERDTLT GGTGADTFLF SARTDSYRTD SASFTDLITD FDPAQDRIDL 
SGLGFSGFGN GYDGTLLLQV NAAGTRTYLK SLEADADGQR FEIALDGDFS GQLDSGNVIF 
EAGVFNAKDF GALGDGASDD RPAIQAAIDA AYAAGGGTVY LPAGEYRVSP TGDPGDGCLM 
LKDGVYLVGA GMGETVIKLI DGSDQKITGM VRSAYGEETS NFGMSDLTLD GNRDNTSGKV 
DGWFNGYIPG QDGADRNVTI ERVEIREMSG YGFDPHEQTI NLTIRDSVAH DNGLDGFVAD 
YLVDSVFENN VAYNNDRHGF NVVTSTYDFT LSNNVAYGNG GAGLVIQRGA EDLAQPTDIL 
IDGGAYYDNA LEGVLLKMTN NITLQNAEIY GNGYSGVRLY GTEDVQILNN QIHDNAQNVA 
YAEVLLQSFN DVGVSGNFYA TTGTWIEGNV ISGSANSTYG IEERNDGTDY SSLYANTIDG 
VQTGAVRLNG AHSIVSDQPG TGQQATLEGT TGNDTLGGSD AHETLLGLDG DDRLDGGAGN 
DILDGGVGRD TLTGGAGADT FRFSAREDSY RTASTSFTDL ITDFDPAQDR IDLSALGFTG 
LGDGYDGTLL VTTGSGGSRT YLKSLEADAE GRRFEIALDG DFVGLLDASN LIFERPAIEG 
DAGNNALLGT SVAETLLGHA GNDTLDGAGG DDILVGGAGS DSLTGGAGAD VFRFDALSDS 
QRNYDTGDNQ GDRITDFAVG EDKLDVSALG FTGLGDGYNG TLVLVLNSAG DRTYVKSYEN 
GADGYRFEFS LDGNYQGLLG NEDFIFATPS GQQLLEGTAG NDSLQGTAAD EVIHGGSGRD 
TLAGGAGADV FRFSELTDSY RTDSASYADL ITDFDASEDR IDLSGLGFSG LGNGYGGTLA 
LQVNSAGTRT YLKSYEANAA GERFELSLDG DLSGLDESYL VFDERVVLAG GDGNDTLSGG 
SAAEELLGGA GNDSLSGGAG NDILDGGAGR DTLSGGSGSD IFRFGDALDS FRNYNSGANV 
TDSIADFTHG ADLIDLSALG YTGLGDGYNG TLAIVLNDAG TKTYLKDRGG DAEGNRFEIS 
LEGNHADQLD ASDFIFATAA AATGIEVVGS TPAEEQPVV