15 homologs were found in PanDaTox collection
for query gene HMPREF0424_0159 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013721  HMPREF0424_0159  hypothetical protein  100 
 
 		 201 aa  419  1e-116  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.180291 
 
 
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NC_013522  Taci_1543  type I site-specific deoxyribonuclease, HsdR family  29.3 
 
 		 1033 aa  82.4  0.000000000000004  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
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NC_013174  Jden_1501  type I site-specific deoxyribonuclease, HsdR family  32.65 
 
 		 1034 aa  76.6  0.0000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.573056  normal  0.735582 
 
 
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NC_008786  Veis_2424  HsdR family type I site-specific deoxyribonuclease  27.21 
 
 		 1016 aa  70.9  0.00000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.831432  normal  1 
 
 
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NC_012669  Bcav_0502  type I site-specific deoxyribonuclease, HsdR family  29.25 
 
 		 1015 aa  71.2  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.840857 
 
 
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NC_010577  XfasM23_2179  HsdR family type I site-specific deoxyribonuclease  27.03 
 
 		 1007 aa  65.9  0.0000000004  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
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NC_010513  Xfasm12_2271  type I restriction-modification system endonuclease  27.7 
 
 		 1009 aa  64.7  0.0000000008  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_1853  type I restriction enzyme EcoR124II R protein  25.35 
 
 		 989 aa  62.8  0.000000004  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
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NC_009634  Mevan_0082  HsdR family type I site-specific deoxyribonuclease  28.83 
 
 		 1014 aa  61.2  0.00000001  Methanococcus vannielii SB  Archaea  normal  0.0348133  n/a   
 
 
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NC_008699  Noca_1107  HsdR family type I site-specific deoxyribonuclease  24.32 
 
 		 1013 aa  55.5  0.0000006  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009802  CCC13826_1410  type I restriction enzyme EcoR124II R protein (R.EcoR124II)  28.1 
 
 		 1031 aa  48.9  0.00005  Campylobacter concisus 13826  Bacteria  normal  0.643236  n/a   
 
 
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NC_009441  Fjoh_4396  HsdR family type I site-specific deoxyribonuclease  25.44 
 
 		 1038 aa  47.8  0.0001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.806316  n/a   
 
 
-
 
NC_010682  Rpic_3450  type I restriction system endonuclease  26.36 
 
 		 224 aa  47  0.0002  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3053  HsdR family type I site-specific deoxyribonuclease  25.44 
 
 		 1038 aa  46.6  0.0003  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
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NC_009052  Sbal_0775  HsdR family type I site-specific deoxyribonuclease  23.68 
 
 		 1041 aa  44.7  0.0009  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
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