9 homologs were found in PanDaTox collection
for query gene GWCH70_3473 on replicon NC_012790
Organism: Geobacillus sp. WCH70



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012790  GWCH70_3473  type II restriction endonuclease, putative  100 
 
 
268 aa  546  1e-154  Geobacillus sp. WCH70  Bacteria  unclonable  0.0000000242117  n/a   
 
 
-
 
NC_003909  BCE_4604  Type II restriction endonuclease, putative  63.81 
 
 
264 aa  357  8e-98  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.00000000226675  n/a   
 
 
-
 
NC_008261  CPF_0140  putative type II restriction endonuclease  56.93 
 
 
274 aa  310  1e-83  Clostridium perfringens ATCC 13124  Bacteria  decreased coverage  0.000000224977  n/a   
 
 
-
 
NC_013161  Cyan8802_4357  hypothetical protein  31.73 
 
 
280 aa  125  7e-28  Cyanothece sp. PCC 8802  Bacteria  normal  0.0257657  normal  0.167684 
 
 
-
 
NC_011726  PCC8801_4297  putative type II restriction endonuclease  27.66 
 
 
195 aa  69.3  0.00000000006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013162  Coch_0686  type II restriction endonuclease TdeIII  26.27 
 
 
257 aa  48.1  0.0002  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1726  type II restriction endonuclease TdeIII  26.67 
 
 
261 aa  46.6  0.0004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000000000220311  n/a   
 
 
-
 
NC_007514  Cag_0333  type II restriction endonuclease TdeIII  29.37 
 
 
260 aa  44.7  0.002  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0268952  n/a   
 
 
-
 
NC_002967  TDE0911  type II restriction endonuclease TdeIII  25.48 
 
 
258 aa  43.1  0.005  Treponema denticola ATCC 35405  Bacteria  normal  0.436049  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>