13 homologs were found in PanDaTox collection
for query gene Franean1_6706 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_6706  hypothetical protein  100 
 
 
488 aa  966    Frankia sp. EAN1pec  Bacteria  normal  0.58989  normal 
 
 
-
 
NC_007777  Francci3_3654  hypothetical protein  38.99 
 
 
454 aa  173  5e-42  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4141  aminoglycoside phosphotransferase  38.52 
 
 
782 aa  150  4e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4264  nucleic acid binding OB-fold tRNA/helicase-type  37.26 
 
 
636 aa  149  2.0000000000000003e-34  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00811307  normal  0.186762 
 
 
-
 
NC_013501  Rmar_2247  hypothetical protein  37.37 
 
 
608 aa  140  4.999999999999999e-32  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2302  Mn2+-dependent serine/threonine protein kinase  27.83 
 
 
561 aa  115  2.0000000000000002e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0496203 
 
 
-
 
NC_013730  Slin_4128  serine/threonine protein kinase  31.16 
 
 
651 aa  80.9  0.00000000000004  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.00319309 
 
 
-
 
NC_014165  Tbis_3084  serine/threonine protein kinase  26.92 
 
 
766 aa  53.1  0.00001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1804  protein kinase domain-containing protein  28.89 
 
 
237 aa  48.9  0.0002  Colwellia psychrerythraea 34H  Bacteria  normal  0.3178  n/a   
 
 
-
 
NC_009654  Mmwyl1_3644  protein kinase  27.16 
 
 
426 aa  43.9  0.006  Marinomonas sp. MWYL1  Bacteria  normal  0.0238226  normal  0.351837 
 
 
-
 
NC_013170  Ccur_03420  protein kinase family protein  30.93 
 
 
587 aa  43.5  0.008  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.416082 
 
 
-
 
NC_012791  Vapar_2845  serine/threonine protein kinase  31.46 
 
 
577 aa  43.5  0.009  Variovorax paradoxus S110  Bacteria  normal  0.36762  n/a   
 
 
-
 
NC_013595  Sros_8510  Serine/threonine protein kinase-like protein  32.53 
 
 
596 aa  43.5  0.01  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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