Gene Rmar_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2247 
Symbol 
ID8568911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2609576 
End bp2611402 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003291514 
Protein GI268317795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCAT TCCCCACACC CGGTCAGTAC CGCGAGGCGG TGCAGTTTCC GGAGACGGCC 
TTCACCGATC CGGAGCTACA ACAGGCCACG CCCGAGGTGG ACGCGCTGGG ACTGCCCCGG
GCGATCAGCG GGGCCTTTGC GACCGTGTTC GTGCTGCAGG GGCGTGCGCG GCGGTGGGCC
GTGCGCTGTT TCCATGCCCC GGTGCCGGAT CTGGCCGAGC GCTACCGGGC GCTGGCCCGA
CATCTGGAGC GGCATCCGTC GCTTCCCTTT GTGGACTTTG CGTTTCAGGA GGACGGTATT
CGGGTGGACG ACCGGACCTG GCCCCTGCTG AAAATGGACT GGGCCGAGGG CGTGCCGCTC
AACCGCTTCG TGGCCGAGCA CCTGGACGCG CCGGAGGTGC TCGCGCGTCT GATTGAGGCC
TGGGTGGCGC TGGTGGAACA GCTGGAAGGG GCCGGGATAG CCCACGGCGA CCTGCAGCAC
GGCAACGTGC TCGTCGCGCA GGAATCGGAC AGACTGAAGC TCACGCTGGT CGATTACGAC
GCGGTGTACG TGCCGGCGCT GCGCGGTCGC AAAAGTCCCG AACTCGGCCA TCGTAACTAC
CAGCACCCGG ATCGAAGCGA GGCGGACTTC GGCCCGTGGA TCGATCGCTT TCCGGCGCTG
GTCATCTACA CGGCGCTGCA GGCATTGCAG CACCGACCGG AACTGGGACG TCGCTACCCG
CTCGACGAAG CGCTGCTGTT CCGGGCGGGC GACTTTTACG CACCGGACCG CTCGCCGCTG
TTTCAGGAGC TGGCCGGGCT GGAGCCGATC CGGCCGCTGG TGACGCTGCT TCGACAGGCC
TGTCACCTGG AGCCCGAGCA GGTGCCCTCG CTGGCCGAGG TGCACGAAGG CGCGGTCAAA
GCCGAACCCG TACAGACCCG GAGGCGCAGG CCGCGTCGGC AGCCGGAAGC GACGCGCGGT
CGTTTCGAGC GGGCCTGGCT TCCGGGCGTG CTGGGCACCG GTGCCCTCGG AGCGGGCCTG
ACGCTTGCGG TCGGGCTCAC CGCGGGCGTC GCCGTGTGGG GGCTCGGGGG GCTGGCGATG
CTGGGAGCGG CGCTGGCACA TTACCGGCGG CTACCGATCG TGCGGCGTCG GCGGCGCCTC
CGGCGCGAGC TGGCTTTCTT CGACCGCCTG CTGGAGCGGC TGCACCGGCA GCTCGACCGG
ATCGACGTGG AGCGGCGCAC GTTTCTCGCG CAGCAGCAGA CGCTTCGGGC ACGGCGGCTG
GAGGAATTGC GCGAAGAAGC GCTGTACGAT CGGCTAAAGT ATCATTTCAT CGACGAGGCC
GCGCAGTTCG AGGGGCTGTC GCACAAAGTA GTGATCCGGC TCAAGGCGGC CGGCATCCGC
AACGCCTATC AGGCCACGCC CGAGCGGGTG GCCCGTGCCC GACAGCTCAG CGACGAGACG
CGCGCTCGCG TCAACCTCTG GCGGGCCGGA CTGGTCGCCC GCTACCGGGA CGAGCTGCCC
GATCGGCTCT CGCCGGCCGA AGAGCTGCGC CTGGAGCGCT ACGTGCGCCA GCGGCTGGCC
CGCTTCGAAG AAGAGCGGCA GCGGTTGCTC GAGCGCATGC AGGTGCAGCA GAAAGAACGG
GAGCAGGTCG CACAACGACT GGCGACGCTG CCTCCGCTGA CGTTCGCTCA CTATCTGGCC
TACCTGCTGC GGTGGCGCCC CTTGCCGTCG CCCGAGTCGG CACCGGCGCC CCCGGTGCCC
CCGCCACCTT CTGTCGTTCA TACCGCGCCA CCCGCCGTTT CCGTAGCGCT CGACGAAGAT
CGGCCCTGGT GGGAACAGGC GGGATAG
 
Protein sequence
MPAFPTPGQY REAVQFPETA FTDPELQQAT PEVDALGLPR AISGAFATVF VLQGRARRWA 
VRCFHAPVPD LAERYRALAR HLERHPSLPF VDFAFQEDGI RVDDRTWPLL KMDWAEGVPL
NRFVAEHLDA PEVLARLIEA WVALVEQLEG AGIAHGDLQH GNVLVAQESD RLKLTLVDYD
AVYVPALRGR KSPELGHRNY QHPDRSEADF GPWIDRFPAL VIYTALQALQ HRPELGRRYP
LDEALLFRAG DFYAPDRSPL FQELAGLEPI RPLVTLLRQA CHLEPEQVPS LAEVHEGAVK
AEPVQTRRRR PRRQPEATRG RFERAWLPGV LGTGALGAGL TLAVGLTAGV AVWGLGGLAM
LGAALAHYRR LPIVRRRRRL RRELAFFDRL LERLHRQLDR IDVERRTFLA QQQTLRARRL
EELREEALYD RLKYHFIDEA AQFEGLSHKV VIRLKAAGIR NAYQATPERV ARARQLSDET
RARVNLWRAG LVARYRDELP DRLSPAEELR LERYVRQRLA RFEEERQRLL ERMQVQQKER
EQVAQRLATL PPLTFAHYLA YLLRWRPLPS PESAPAPPVP PPPSVVHTAP PAVSVALDED
RPWWEQAG