| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4264 |
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| Symbol | |
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| ID | 5672619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5090279 |
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| End bp | 5092189 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641243137 |
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| Product | nucleic acid binding OB-fold tRNA/helicase-type |
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| Protein accession | YP_001508554 |
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| Protein GI | 158316046 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00811307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.186762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC CAACCCTGCT CGACTACCAG CAGGCCGTCC AGATCCCGCG GCTGGCCTTC
CTGGACGACC AGCTGCGGGA GAGCGTGCCG CGGCTGACCC CGCTGGGCAT GCCGGCGGTC
GCCACCGGCG GGTTCGCCCT GACCTTCGAC GTAAGCCTGG GCGGCCGGCG CTACGCCGTG
CGCTGCTTCC ACCGGCACAG CGACAACCTG GAGCTGCGCT ACGCCTGCAT CGCCGAGTTC
GTCCGCTCGG CCGCGCTGGA CTTCCTGGTC GGCGTGGACT ACCAGCCGGC CGGAATCCGG
GTGCGCGGCC ACTGCTGGCC GATCGTGCGG ATGGAGTGGA TCGACGGCGC GCGGCTCGAC
GACTGGGTCC AGGAGAACCT GGACCGGCCC GCGCACCTCG ACCGGGCCCG GCTCGGCCTG
GGCTTCGCCG TCGCCGAGCT GCGCCGCCGC GGTGCCGCGC ACGGCGACCT GCAGCACGGC
AACATCCTCG TGCTGCCGGA CAGGTCCGTA CGGCTCGTCG ACTACGACGG GATGTACCTG
CCGGGGCTGA GCGGGCTCGG CGCCTCCGAG CGGGGCCACC GCAACTACCA GCATCCGGAC
CGCTCGAACC AGTACGACGT CACGCTCGAC CGCTTCGCCG AAGAGGTGAT CACGGTGTCG
CTCGCCGCCC TCGCCCGGAA TCCGGGCCTG TGGCGTGAGT TCAACACCGG CGAGAACCTG
ATCTTCTCGG CCGCGGACTT CGCCGACCCG TCCGCCTCGG CCCTGTTCGC ACGCCTCGAG
CGGATGCCCG GGGTCGCGGC CGCCGCGCGC CGGCTGCGGG ACGCCTGCCT GGTCGACTTC
CAGGACGTGC CGGCGGTGCT CGACGCCGAC GCGCTCGCCC CGTACCGGTC GGGCGCGGTG
GGCGGGGCCG GCTGCGCCGG GGTGACCGGC CCGGCACTCA CGGCCGGCCC GGCGCCCGCG
GGCCGCGCGG CACCCGTGGA CCGTTCAGCG CTTCCGGCCG GCCCGGTGCT CCCGGCGGCT
CCGCCGCGAC GGCAGCATCA GCCACATCAG CCACATCAGC CACATCCGGT GCGACCTGTG
CAGCCGGCGC GGCCGGCTGG TCCGGTGCCG GTGGGCGGGC ACGAGGCGGT GACACGGCAC
CCGCGTCCGG GCGGCGCCGT GGGTGTGGTC AGCACGGTGA GCGCGGCGCG TTACCTGCGC
ACCCGGCCGC TGCGGCCGGC CCCGGTGCCC GTCGGTGGGC CCGGGGTGCT CTCCGCCCTC
GACCGGGCCG GTCTGCTCGC CCGCCGGGGG GAGGAGATCA CCGTCGTCGG CCGGGTCGTC
CGGGTCCGGC AGCTGGAACG CACCGGCATG ATCACGGTCC TGGAGTTCGG GGACGACCGT
GGCGGCGGCT TCAGTGTCGT CGGGTGGGAC CGGGTCAGCC GGGAGCTCAT CGCGACCCAC
GGCGACCCTG CGCGGCTCGC GGGCACCTGG GTGCGGGTGA TCGGGCAGTT GGCCGTGGAC
GACCGGGGGA GCTCGTTTCA CGGGCCCACC GCGACGTCGC CGGCGCGGCT CGTTCGGCCG
ACCGGGCCGA GCTGGTCCAG CCAGTCCAGC GGCTCGGGCG GCGACGGCCG CGACGGCCGG
GGGAGCCGCG ACGGCAGCGG GAGCCGGGAC AACCGGCGGG GCCGATCCGA CGCTGCCGCC
GGGCGGCCGC CCGCGCCCCG GATCGAGCTG CGCCGGGGGA GCCTGCTGCG GGTGCTGACC
GAGCGCCAGG CCGAGAGCCT GCTGAACCGG CCCGGGACGG TGCCCGCCGC GCCCGCGACC
CGCTCGGCCT ACGGATCGGG GCCGGTCCTG CCGCCCCGCC GGCCGCTCCC TCCGCCGCCG
GTGCCGGGGC CGACGCTGAC CCGTTCGCCG TCGTGGCGCG GGTGGAGCTG A
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| Protein sequence | MKLPTLLDYQ QAVQIPRLAF LDDQLRESVP RLTPLGMPAV ATGGFALTFD VSLGGRRYAV
RCFHRHSDNL ELRYACIAEF VRSAALDFLV GVDYQPAGIR VRGHCWPIVR MEWIDGARLD
DWVQENLDRP AHLDRARLGL GFAVAELRRR GAAHGDLQHG NILVLPDRSV RLVDYDGMYL
PGLSGLGASE RGHRNYQHPD RSNQYDVTLD RFAEEVITVS LAALARNPGL WREFNTGENL
IFSAADFADP SASALFARLE RMPGVAAAAR RLRDACLVDF QDVPAVLDAD ALAPYRSGAV
GGAGCAGVTG PALTAGPAPA GRAAPVDRSA LPAGPVLPAA PPRRQHQPHQ PHQPHPVRPV
QPARPAGPVP VGGHEAVTRH PRPGGAVGVV STVSAARYLR TRPLRPAPVP VGGPGVLSAL
DRAGLLARRG EEITVVGRVV RVRQLERTGM ITVLEFGDDR GGGFSVVGWD RVSRELIATH
GDPARLAGTW VRVIGQLAVD DRGSSFHGPT ATSPARLVRP TGPSWSSQSS GSGGDGRDGR
GSRDGSGSRD NRRGRSDAAA GRPPAPRIEL RRGSLLRVLT ERQAESLLNR PGTVPAAPAT
RSAYGSGPVL PPRRPLPPPP VPGPTLTRSP SWRGWS
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