11 homologs were found in PanDaTox collection
for query gene Franean1_4264 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_4264  nucleic acid binding OB-fold tRNA/helicase-type  100 
 
 
636 aa  1240    Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00811307  normal  0.186762 
 
 
-
 
NC_010002  Daci_2302  Mn2+-dependent serine/threonine protein kinase  37.07 
 
 
561 aa  206  1e-51  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0496203 
 
 
-
 
NC_013501  Rmar_2247  hypothetical protein  39.67 
 
 
608 aa  190  5e-47  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4141  aminoglycoside phosphotransferase  37.72 
 
 
782 aa  167  5e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3654  hypothetical protein  35.14 
 
 
454 aa  155  2.9999999999999998e-36  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6706  hypothetical protein  36.92 
 
 
488 aa  153  1e-35  Frankia sp. EAN1pec  Bacteria  normal  0.58989  normal 
 
 
-
 
NC_013730  Slin_4128  serine/threonine protein kinase  28.57 
 
 
651 aa  95.9  2e-18  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.00319309 
 
 
-
 
NC_013757  Gobs_1752  serine/threonine protein kinase with PASTA sensor(s)  33.78 
 
 
614 aa  52.4  0.00003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1509  serine/threonine protein kinase  30 
 
 
351 aa  44.7  0.005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  1.02853e-17 
 
 
-
 
NC_003910  CPS_1804  protein kinase domain-containing protein  29.73 
 
 
237 aa  44.3  0.008  Colwellia psychrerythraea 34H  Bacteria  normal  0.3178  n/a   
 
 
-
 
NC_010506  Swoo_2627  protein serine/threonine phosphatase  23.17 
 
 
576 aa  43.9  0.01  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0575166 
 
 
-
 
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