More than 300 homologs were found in PanDaTox collection
for query gene Francci3_0369 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_2819  acyl-CoA dehydrogenase domain protein  64.31 
 
 
543 aa  664    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.708717  normal  0.776174 
 
 
-
 
NC_007777  Francci3_0369  acyl-CoA dehydrogenase-like  100 
 
 
561 aa  1119    Frankia sp. CcI3  Bacteria  normal  normal  0.165313 
 
 
-
 
NC_009380  Strop_3981  acyl-CoA dehydrogenase domain-containing protein  68.4 
 
 
542 aa  720    Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10686  acyl-CoA dehydrogenase fadE8  60.52 
 
 
542 aa  637    Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1782  acyl-CoA dehydrogenase domain protein  66.91 
 
 
543 aa  689    Thermomonospora curvata DSM 43183  Bacteria  normal  0.121975  n/a   
 
 
-
 
NC_013595  Sros_6703  acyl-CoA dehydrogenase  68.22 
 
 
539 aa  693    Streptosporangium roseum DSM 43021  Bacteria  normal  0.619428  normal  0.598505 
 
 
-
 
NC_009077  Mjls_1003  acyl-CoA dehydrogenase domain-containing protein  61.52 
 
 
551 aa  646    Mycobacterium sp. JLS  Bacteria  normal  normal  0.265858 
 
 
-
 
NC_009953  Sare_4366  acyl-CoA dehydrogenase domain-containing protein  68.4 
 
 
542 aa  720    Salinispora arenicola CNS-205  Bacteria  normal  0.128811  hitchhiker  0.00458691 
 
 
-
 
NC_013159  Svir_38660  acyl-CoA dehydrogenase  65.43 
 
 
548 aa  692    Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6434  acyl-CoA dehydrogenase domain-containing protein  74.69 
 
 
572 aa  810    Frankia sp. EAN1pec  Bacteria  normal  0.441597  normal  0.0443202 
 
 
-
 
NC_009338  Mflv_5086  acyl-CoA dehydrogenase domain-containing protein  61.65 
 
 
552 aa  640    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.480357  normal  0.429273 
 
 
-
 
NC_008146  Mmcs_0975  acyl-CoA dehydrogenase-like protein  61.71 
 
 
551 aa  650    Mycobacterium sp. MCS  Bacteria  normal  0.315485  n/a   
 
 
-
 
NC_014165  Tbis_2251  acyl-CoA dehydrogenase domain-containing protein  66.36 
 
 
534 aa  689    Thermobispora bispora DSM 43833  Bacteria  normal  0.141599  normal  0.0458056 
 
 
-
 
NC_013093  Amir_6225  acyl-CoA dehydrogenase domain protein  66.36 
 
 
529 aa  647    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0993  acyl-CoA dehydrogenase domain-containing protein  61.71 
 
 
551 aa  650    Mycobacterium sp. KMS  Bacteria  normal  normal  0.619354 
 
 
-
 
NC_008726  Mvan_1269  acyl-CoA dehydrogenase domain-containing protein  62.06 
 
 
551 aa  627  1e-178  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.934265 
 
 
-
 
NC_014158  Tpau_1017  acyl-CoA dehydrogenase domain protein  59.67 
 
 
549 aa  622  1e-177  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1752  acyl-CoA dehydrogenase domain protein  62.52 
 
 
550 aa  614  9.999999999999999e-175  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.907741  normal 
 
 
-
 
NC_008699  Noca_2353  acyl-CoA dehydrogenase domain-containing protein  58.68 
 
 
557 aa  571  1e-161  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0523  acyl-CoA dehydrogenase-like  53.59 
 
 
562 aa  565  1e-160  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5650  acyl-CoA dehydrogenase domain-containing protein  58.02 
 
 
542 aa  562  1.0000000000000001e-159  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.108739  normal  0.35349 
 
 
-
 
NC_013739  Cwoe_5281  acyl-CoA dehydrogenase domain protein  59.19 
 
 
550 aa  560  1e-158  Conexibacter woesei DSM 14684  Bacteria  normal  0.656776  normal 
 
 
-
 
NC_008740  Maqu_3582  acyl-CoA dehydrogenase domain-containing protein  50.92 
 
 
563 aa  547  1e-154  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2837  acyl-CoA dehydrogenase domain-containing protein  53.1 
 
 
563 aa  542  1e-153  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.218018  normal 
 
 
-
 
NC_013441  Gbro_4257  acyl-CoA dehydrogenase domain protein  54.46 
 
 
559 aa  541  9.999999999999999e-153  Gordonia bronchialis DSM 43247  Bacteria  normal  0.175294  n/a   
 
 
-
 
NC_011004  Rpal_0592  acyl-CoA dehydrogenase domain protein  50 
 
 
555 aa  532  1e-150  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.684564  n/a   
 
 
-
 
NC_009656  PSPA7_1136  putative acyl-CoA dehydrogenase  52.29 
 
 
549 aa  519  1e-146  Pseudomonas aeruginosa PA7  Bacteria  normal  0.113236  n/a   
 
 
-
 
NC_008463  PA14_12450  putative acyl-CoA dehydrogenase  52.29 
 
 
549 aa  519  1e-146  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.744649  normal 
 
 
-
 
NC_008340  Mlg_1719  acyl-CoA dehydrogenase domain-containing protein  53.04 
 
 
559 aa  518  1.0000000000000001e-145  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.447043 
 
 
-
 
NC_013739  Cwoe_2695  acyl-CoA dehydrogenase domain protein  54.82 
 
 
545 aa  515  1.0000000000000001e-145  Conexibacter woesei DSM 14684  Bacteria  normal  0.682945  normal  0.378302 
 
 
-
 
NC_007492  Pfl01_4943  Acyl-CoA dehydrogenase-like  50.64 
 
 
549 aa  509  1e-143  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4338  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.38 
 
 
549 aa  506  9.999999999999999e-143  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1847  acyl-CoA dehydrogenase domain-containing protein  53.2 
 
 
550 aa  507  9.999999999999999e-143  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.440141  normal  0.493968 
 
 
-
 
NC_009439  Pmen_3764  acyl-CoA dehydrogenase domain-containing protein  50.27 
 
 
549 aa  502  1e-141  Pseudomonas mendocina ymp  Bacteria  normal  0.598594  normal  0.0554036 
 
 
-
 
NC_012791  Vapar_2916  acyl-CoA dehydrogenase domain protein  52.36 
 
 
546 aa  500  1e-140  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00944  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  47.25 
 
 
560 aa  496  1e-139  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.874747  n/a   
 
 
-
 
NC_010501  PputW619_0640  acyl-CoA dehydrogenase domain-containing protein  51.65 
 
 
559 aa  497  1e-139  Pseudomonas putida W619  Bacteria  normal  0.749852  normal 
 
 
-
 
NC_010681  Bphyt_3763  acyl-CoA dehydrogenase domain protein  51.08 
 
 
561 aa  495  1e-139  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.75018 
 
 
-
 
NC_007951  Bxe_A0173  Acyl-CoA dehydrogenase  51.35 
 
 
561 aa  494  9.999999999999999e-139  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_09290  acyl-CoA dehydrogenase  51.74 
 
 
571 aa  489  1e-137  Azotobacter vinelandii DJ  Bacteria  normal  0.142361  n/a   
 
 
-
 
NC_009512  Pput_4656  acyl-CoA dehydrogenase domain-containing protein  51.1 
 
 
550 aa  490  1e-137  Pseudomonas putida F1  Bacteria  normal  normal  0.216664 
 
 
-
 
NC_010322  PputGB1_4834  acyl-CoA dehydrogenase domain-containing protein  51.19 
 
 
550 aa  489  1e-137  Pseudomonas putida GB-1  Bacteria  normal  0.938262  normal 
 
 
-
 
NC_002947  PP_4780  acyl-CoA dehydrogenase domain-containing protein  51.01 
 
 
550 aa  488  1e-136  Pseudomonas putida KT2440  Bacteria  normal  0.303527  hitchhiker  0.00591476 
 
 
-
 
NC_008786  Veis_2832  acyl-CoA dehydrogenase domain-containing protein  51.69 
 
 
559 aa  487  1e-136  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.716167  normal  0.258614 
 
 
-
 
NC_011071  Smal_2958  acyl-CoA dehydrogenase domain protein  53.8 
 
 
545 aa  486  1e-136  Stenotrophomonas maltophilia R551-3  Bacteria  hitchhiker  0.000179146  hitchhiker  0.0000711281 
 
 
-
 
NC_010622  Bphy_2924  acyl-CoA dehydrogenase domain-containing protein  51.91 
 
 
557 aa  484  1e-135  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0193  acyl-CoA dehydrogenase domain-containing protein  51.09 
 
 
559 aa  479  1e-134  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3817  acyl-CoA dehydrogenase  48.98 
 
 
548 aa  477  1e-133  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0215  acyl-CoA dehydrogenase domain-containing protein  50.72 
 
 
559 aa  473  1e-132  Burkholderia pseudomallei 668  Bacteria  normal  0.389081  n/a   
 
 
-
 
NC_007434  BURPS1710b_0410  Acyl-CoA dehydrogenase  50.54 
 
 
559 aa  471  1.0000000000000001e-131  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0227  acyl-CoA dehydrogenase domain-containing protein  50.54 
 
 
559 aa  471  1.0000000000000001e-131  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2564  acyl-CoA dehydrogenase-like  49.91 
 
 
579 aa  472  1.0000000000000001e-131  Polaromonas sp. JS666  Bacteria  normal  normal  0.375383 
 
 
-
 
NC_013235  Namu_4426  acyl-CoA dehydrogenase domain protein  54.8 
 
 
542 aa  468  9.999999999999999e-131  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.880642 
 
 
-
 
NC_004311  BRA0598  acyl-CoA dehydrogenase family protein  47.88 
 
 
551 aa  464  1e-129  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0562  acyl-CoA dehydrogenase family protein  47.7 
 
 
551 aa  463  1e-129  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0161  acyl-CoA dehydrogenase-like protein  47.85 
 
 
561 aa  462  1e-129  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_3912  acyl-CoA dehydrogenase-like  47.3 
 
 
548 aa  465  1e-129  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.0000271467  n/a   
 
 
-
 
NC_010508  Bcenmc03_0131  acyl-CoA dehydrogenase domain-containing protein  50.36 
 
 
550 aa  464  1e-129  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0081  acyl-CoA dehydrogenase domain-containing protein  49.82 
 
 
551 aa  459  9.999999999999999e-129  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2938  acyl-CoA dehydrogenase-like  49.64 
 
 
550 aa  459  9.999999999999999e-129  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1360  acyl-CoA dehydrogenase-like  49.63 
 
 
543 aa  462  9.999999999999999e-129  Chelativorans sp. BNC1  Bacteria  normal  0.165599  n/a   
 
 
-
 
NC_008542  Bcen2424_0117  acyl-CoA dehydrogenase domain-containing protein  49.64 
 
 
550 aa  459  9.999999999999999e-129  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_04054  isovaleryl CoA dehydrogenase  48.19 
 
 
541 aa  456  1e-127  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4431  isovaleryl CoA dehydrogenase  48.19 
 
 
541 aa  456  1e-127  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0100  acyl-CoA dehydrogenase domain protein  50.09 
 
 
551 aa  457  1e-127  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3639  acyl-CoA dehydrogenase domain protein  48.82 
 
 
553 aa  457  1e-127  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_5703  isovaleryl CoA dehydrogenase  48.19 
 
 
541 aa  456  1e-127  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3826  isovaleryl CoA dehydrogenase  48.19 
 
 
541 aa  456  1e-127  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.000253189 
 
 
-
 
NC_009801  EcE24377A_4747  isovaleryl CoA dehydrogenase  48.19 
 
 
541 aa  456  1e-127  Escherichia coli E24377A  Bacteria  normal  0.319243  n/a   
 
 
-
 
NC_012892  B21_04016  hypothetical protein  48.19 
 
 
541 aa  456  1e-127  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3806  acyl-CoA dehydrogenase domain protein  48.19 
 
 
541 aa  454  1.0000000000000001e-126  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1763  acyl-CoA dehydrogenase  47.01 
 
 
547 aa  452  1.0000000000000001e-126  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4658  isovaleryl CoA dehydrogenase  48 
 
 
541 aa  454  1.0000000000000001e-126  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.61602 
 
 
-
 
NC_012856  Rpic12D_3316  acyl-CoA dehydrogenase domain protein  48.45 
 
 
553 aa  454  1.0000000000000001e-126  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0116  acyl-CoA dehydrogenase domain-containing protein  49.45 
 
 
550 aa  452  1.0000000000000001e-126  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0365  isovaleryl CoA dehydrogenase  46.48 
 
 
540 aa  451  1e-125  Enterobacter sp. 638  Bacteria  normal  normal  0.013198 
 
 
-
 
NC_010658  SbBS512_E4717  isovaleryl CoA dehydrogenase  47.99 
 
 
541 aa  451  1e-125  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0204  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  47.89 
 
 
553 aa  446  1.0000000000000001e-124  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3297  Acyl-CoA dehydrogenase  48.91 
 
 
550 aa  446  1.0000000000000001e-124  Burkholderia sp. 383  Bacteria  normal  0.165535  normal 
 
 
-
 
NC_007963  Csal_2827  acyl-CoA dehydrogenase-like protein  48.33 
 
 
550 aa  448  1.0000000000000001e-124  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.952078  n/a   
 
 
-
 
NC_009832  Spro_0440  isovaleryl CoA dehydrogenase  46.9 
 
 
544 aa  444  1e-123  Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.00000763646 
 
 
-
 
NC_009668  Oant_3665  acyl-CoA dehydrogenase domain-containing protein  48.12 
 
 
530 aa  444  1e-123  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0107  acyl-CoA dehydrogenase domain-containing protein  49.64 
 
 
550 aa  444  1e-123  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0117  acyl-CoA dehydrogenase domain-containing protein  49.82 
 
 
550 aa  443  1e-123  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0120  acyl-CoA dehydrogenase domain-containing protein  47.72 
 
 
564 aa  442  1e-123  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4645  isovaleryl CoA dehydrogenase  46.2 
 
 
540 aa  439  9.999999999999999e-123  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4774  isovaleryl CoA dehydrogenase  46.2 
 
 
540 aa  439  9.999999999999999e-123  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0121  putative oxidoreductase flavoprotein FAD  48.69 
 
 
557 aa  438  1e-121  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4795  isovaleryl CoA dehydrogenase  46.01 
 
 
540 aa  438  1e-121  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.0438512  normal 
 
 
-
 
NC_011080  SNSL254_A4738  isovaleryl CoA dehydrogenase  46.01 
 
 
540 aa  436  1e-121  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.11297  normal 
 
 
-
 
NC_010159  YpAngola_A0687  isovaleryl CoA dehydrogenase  46.62 
 
 
547 aa  436  1e-121  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0937  acyl-CoA dehydrogenase domain-containing protein  46 
 
 
550 aa  437  1e-121  Sinorhizobium medicae WSM419  Bacteria  normal  0.0783205  normal  0.320955 
 
 
-
 
NC_011149  SeAg_B4655  isovaleryl CoA dehydrogenase  46.2 
 
 
540 aa  437  1e-121  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3643  isovaleryl CoA dehydrogenase  46.42 
 
 
547 aa  434  1e-120  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3788  isovaleryl CoA dehydrogenase  46.42 
 
 
547 aa  434  1e-120  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_4029  acyl-CoA dehydrogenase domain-containing protein  48.6 
 
 
546 aa  431  1e-119  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3955  acyl-CoA dehydrogenase domain-containing protein  48.41 
 
 
546 aa  430  1e-119  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3029  acyl-CoA dehydrogenase domain-containing protein  48.6 
 
 
546 aa  431  1e-119  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0160  acyl-CoA dehydrogenase  48.41 
 
 
546 aa  430  1e-119  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1573  acyl-CoA dehydrogenase domain-containing protein  48.6 
 
 
546 aa  431  1e-119  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
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