| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2819 |
|---|
| Symbol | |
|---|
| ID | 9246670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 3365436 |
|---|
| End bp | 3367067 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003680737 |
|---|
| Protein GI | 297561763 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.708717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.776174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCCCA CACACGAGGT GTTCAACCAG GCGCCCCCGC TCGGCGACTA CGCGGCGGCC
GAGGACCCGG CGCTCGTGGA GGGCCTGCGG CGCGAGGGCG CCGGATGGGC CGAGGCCGAG
GTGCGCGAGG TCGGCGACGC GGCCGGTTCG GAGCGGGTCC GCGCCTGGGG CGAGTCCGCC
AACGCCTACC CGCCGGTGCT GCGCACCCAC GACCGCTACG GCCACCGGGT GGATGAGGTC
GACTACCAGC CCGCCTACCA CGTGCTCATG GACCAGGCGG TGGAGCACGG CATGCACGCC
GCGCCGTGGG CGGACGGGCG TCCGGGCGCG CACGTGGCCC GCGCCGCCAA GTTCTTCCTG
TGGTCCCAGC CCGAGGCTGG TCACGGGTGC CCGGTGTCGA TGACCTACGC GGCGGTCCCG
GCCCTGCGCC ACTCCCCCGA ACTGGCGCGG CGGTACGAGC CTCTGCTCAC CGCGCCCGTC
TACGACTTCG GGCTGCGGGC GCCGCACACC AAGCGCGGGC TCCTCGCGGG CATGTCGATG
ACCGAGAAGC AGGGCGGCTC GGACGTGCGC GCCAACACCA CCCGCGCGGT CCCCACCGCC
GAGGGGCACC ACGTGCTGAC CGGGCACAAG TGGTTCACCT CGGCGCCGAT GAGCGACTTC
TTCCTCACCC TGGCGCAGGC GCCCGAGGGG CTGAGCTGCT TCCTGGTGCC CCGGGTGCTG
GAGGACGGCG GCCGCAACGC GCTGCACATC CAACGGCTCA AGGACAAGCT GGGCAACCGC
TCCAACGCGT CGGCGGAGCT GGAGTACGAC GGTGCCGTCG CCCATCTGGT CGGTGAGCCG
GGCAGGGGCG TGCCCACCAT CATCGAGATG GTCAACAGCA CCCGGCTGGA CTGCGTGATC
GGCTCGGCCG CGGGCATGCG CGCCGCGGTG GTGCACGCCC TGCACCACGC CGAGCACCGC
AGCGCCTTCG GCGGGGTGCT GGTCGAGCAG CCGCTGATGC GCAACGTGCT CGCCGACCTG
GCACTGGAGT CGGAGGCGGC GACGGCGCTG ATGACCCGTC TGGCCGGTGC CGTGGACCGC
GCGGTGCGCG GGGACGAGAC CGAGGCGGCC TTCCGCCGCC TGGGGGTGGC CGTGGGCAAG
TTCTGGGTGA CCAAGCGCCA GCCCGCGCAC GCCGCCGAGG CGCTGGAGTG CCTGGGCGGC
AACGGGTACG TGGAGGAGTC GGGGATGCCC CGGCTGTTCC GGGACTCCCC GCTCAACTCC
GTCTGGGAGG GCTCGGGCAA CGTGGCGGCG CTGGACGTGC TGCGCGCGAT GGGCCGCAGC
CCCGAGTCGC TGGAGGCCTT CCTGGCCGAG CTGCGCGCGG CCGCGGGCGT GGACGACCAC
TACGACGCGG CGGTCAAGCG GTTGGAGCAG GCCCTGGGCG ACCCGGAGGA GGCGCAGTAC
CGGGCGCGGA CGGTCGTGGA GCTGATGGCG CTGGTCCTGC AGGCGTCGGT GCTGCTGCGC
CACGCGCCCA CCCCGGTCGC CGAGGCGTTC ACCGCCTCGC GTCTGGGTGG CGAGTGGGGG
CACGTGTTCG GCACCCTGCC CAGAGGGGTG GACACCGAGC TGATCCTGGA CCGGGCCCGC
CCGAGCCGGT GA
|
|---|
| Protein sequence | MPPTHEVFNQ APPLGDYAAA EDPALVEGLR REGAGWAEAE VREVGDAAGS ERVRAWGESA
NAYPPVLRTH DRYGHRVDEV DYQPAYHVLM DQAVEHGMHA APWADGRPGA HVARAAKFFL
WSQPEAGHGC PVSMTYAAVP ALRHSPELAR RYEPLLTAPV YDFGLRAPHT KRGLLAGMSM
TEKQGGSDVR ANTTRAVPTA EGHHVLTGHK WFTSAPMSDF FLTLAQAPEG LSCFLVPRVL
EDGGRNALHI QRLKDKLGNR SNASAELEYD GAVAHLVGEP GRGVPTIIEM VNSTRLDCVI
GSAAGMRAAV VHALHHAEHR SAFGGVLVEQ PLMRNVLADL ALESEAATAL MTRLAGAVDR
AVRGDETEAA FRRLGVAVGK FWVTKRQPAH AAEALECLGG NGYVEESGMP RLFRDSPLNS
VWEGSGNVAA LDVLRAMGRS PESLEAFLAE LRAAAGVDDH YDAAVKRLEQ ALGDPEEAQY
RARTVVELMA LVLQASVLLR HAPTPVAEAF TASRLGGEWG HVFGTLPRGV DTELILDRAR
PSR
|
|---|
| |