Gene SeSA_A4645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4645 
Symbol 
ID6519625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp4518076 
End bp4519698 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content57% 
IMG OID642749584 
Productisovaleryl CoA dehydrogenase 
Protein accessionYP_002117317 
Protein GI194735634 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGC AAACACATAC CGTCTTTAAT CAACCTGCTC CGCTCAATAA CAGTAACTTA 
TTCCTGTCTG ATGGCGCGCT GTGTGAAGCG GTTTCCCGGG AAGGCGCGGG ATGGGATAGC 
GATCTTCTCG CCAGCATTGG CCAACAACTG GGAACGGCGG AATCACTGGA ACTGGGTCGT 
TTGGCGAATG CGTATCCTCC TGAGTTGCTG CGTTACGATC CCCAGGGGCA ACGTCTGGAT 
GACGTTCGCT TTCATCCCGC CTGGCACCTG TTGATGCAGG GGCTTTGCGC TAATCGGGTA 
CATAACCTGG CCTGGGAGGA GGAGGCAAGG GCGGGAAGTT TTGTCGCCCG GGCGGCGCGT 
TTTGTATTAC ATGCTCAGGT AGAAGCGGGA ACACTCTGTC CTGTCACGAT GACCTTTGCC 
GCGACGCCGT TGCTATTGCA GATGCTTCCC GCCACTTTCC ATGACTGGCT GGCGCCGCTG 
CGCAGCGATC GCTACGATTC GCATTTGCTG CCGGGCGGGC AAAAACGGGG CCTGCTCATC 
GGCATGGGAA TGACGGAAAA GCAGGGCGGA TCGGACGTAC TCAGTAATAC GACCCACGCG 
GAGCGGCTGG CGGATGATTC ATATCGGCTG GTGGGACATA AATGGTTTTT CTCTGTGCCG 
CAAAGTGATG CGCACCTCGT GCTGGCGCAG GCAAAAGGAG GATTATCCTG TTTCTTTGTG 
CCGCGTTTCC TGCCAGACGG GCAACGGAAC TCTGTTCGTC TTGAACGCCT GAAAGATAAA 
CTCGGTAATC GATCTAATGC CAGCGCCGAA GTCGAGTTTC AGGATGCCGT CGGCTGGCGT 
CTGGGAGAAG AGGGCGACGG GATTCGGCAT ATCTTAAAGA TGGGCGGTAT GACGCGTCTT 
GACTGCGCGC TCGGGAGTCA TGGCTTAATG CGGCGTGCGT TTTCAGTCGC GATTTACCAT 
GCTCATCAGC GTCAGGCTTT TGGTAAGCCG CTGATCGAAC AACCGTTGAT GCGACAAACC 
TTAAGTCGTA TGGCGCTATG CCTGGAGGGG CAGACGGCGC TTTTGTTTCG GCTGGCGCGC 
GCCTGGGAGC AACGTCGCGA GGCGAAAGAG GCATTATGGG CGCGATTATT CACGCCAGCG 
GCGAAATTCG CCATCTGTAA GCAGGGAATC CCTTTTGTGG CTGAGGCGAT GGAGGTTCTC 
GGCGGGATGG GGTATTGCGA AGAGAGCGAA CTCCCTCGCC TGTACCGTGA AATGCCGGTG 
AACAGTATCT GGGAAGGTTC CGGCAATATC ATGTGTCTGG ATGTACTTCG GGTGCTGACA 
AAACAACACG GCGTCTATGA CGTATTGAGT GAAGCTTTTG CGGAAGTCAA AGGTCAGGAT 
CGCCATTACG ACCGCGCGGT ACGTCAGCTA CAGCAACGTT TACGCAAACC GGACGAAGCA 
ATGGGCAGAG AGATTACGCA GCAGCTTTTC CTGCTGGGAT GCGGAGCGGA AATGCTGCGT 
CATGCCTCGC CGCCGCTGGC GCAAGCGTGG TGTCAGATGA TGCTGGATAC ACGCGGCGAA 
ATGCCGCTGC CTGCCCAGGT GCAAAATGAT TTACTGTTAA GGGCGACCGG GGGACTGCGG 
TAA
 
Protein sequence
MSWQTHTVFN QPAPLNNSNL FLSDGALCEA VSREGAGWDS DLLASIGQQL GTAESLELGR 
LANAYPPELL RYDPQGQRLD DVRFHPAWHL LMQGLCANRV HNLAWEEEAR AGSFVARAAR 
FVLHAQVEAG TLCPVTMTFA ATPLLLQMLP ATFHDWLAPL RSDRYDSHLL PGGQKRGLLI 
GMGMTEKQGG SDVLSNTTHA ERLADDSYRL VGHKWFFSVP QSDAHLVLAQ AKGGLSCFFV 
PRFLPDGQRN SVRLERLKDK LGNRSNASAE VEFQDAVGWR LGEEGDGIRH ILKMGGMTRL 
DCALGSHGLM RRAFSVAIYH AHQRQAFGKP LIEQPLMRQT LSRMALCLEG QTALLFRLAR 
AWEQRREAKE ALWARLFTPA AKFAICKQGI PFVAEAMEVL GGMGYCEESE LPRLYREMPV 
NSIWEGSGNI MCLDVLRVLT KQHGVYDVLS EAFAEVKGQD RHYDRAVRQL QQRLRKPDEA 
MGREITQQLF LLGCGAEMLR HASPPLAQAW CQMMLDTRGE MPLPAQVQND LLLRATGGLR