| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0369 |
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| Symbol | |
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| ID | 3905428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 434264 |
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| End bp | 435949 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877698 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_479485 |
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| Protein GI | 86739085 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.165313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCTCGC CGACCACCGT CAACCGGACA ACGGCGGTTC CCGGGACGTG TTCGTCCCGG
ACCCATGAGG TGACGAACCA GCCTCCGCCC CTCGTGGGGC ACGATGCGGC GGCCGATCCG
GCGCTGCTGG CGGCCCTCGC GCGGGAGGGG GCCGGCTGGC ATATGGACGA TCTGCACCGA
CTCGGTCGGT TGGCCGGCAG CGAGGAGGCC GCCCGCCAGG CCGACGAGGC GAACAGGTTC
CCGCCGCAAC TGCGCACTCA TGATCGTTAC GGGTTTCGCG TTGACGAGGT GGACTTCCAT
CCCTCCTGGC ATGCCCTGAT GGAGGTCGCG GTACGGGAGG GCTTGGCCGG GGCGCCGTGG
GCCGACCCGC GTCCCGGCGC CCATGTCGCC CGCGCCGCGG ACATCCTGGT CTGGGGCACC
GTCGAGCAGG GCCATCTGTG CCCGGTGTCG ATGACCTACG CCGTGGTGCC GGCGCTGCGC
GCCGCCCCGG AGCTCGCCGC CCGCTACGAA CCGTTGCTGA CCAGCCGCGT CTACGATCCG
GGTCTGCGCC CACCCGAGGG CAAGGCCGGC CTGCTGGCGG GCATGGGCAT GACGGAGAAG
CAGGGTGGCT CGGACGTCCG TGCCAACACG ACGACGGCGA CGCCGGCGGG CGACGGGACC
TATCGGCTGC GGGGGCACAA GTGGTTCACC AGCGCCCCGA TGAACGACGT CTTCCTGGTC
TTGGCCCAGG CCCCCGGTGG CCTGTCCTGC TTCTGGGTGC CACGGGTGCT TCCGGACGGC
GTCCGCAACA CCTTTCGCAT CGCGCGGCTG AAGGACAAGC TCGGTAATCG CAGTAACGCC
AGCGGCGAGC CGGAGTTCGA CGACACGGTC GGTTGGCTGG TCGGCGAGGA GGGCGCAGGG
GTCCGGGCCA TCATCGAGAT GGTGGCGATG ACCCGGCTCG ACTCCAGCCT CGGCTCGGCG
GCGGGGATGC GTGCGGCCGT CATGGCGGCA GCCCACCACG TGCGTCACCG ACGCGCGTTC
GGGAGACCGC TCATCGATGC TCCGTTGATG CGCAATGTGC TCGCCGATCT CGCCCTGGAG
TCCGAGGCCG CGACGACCCT GGTGCTCCGG GTGGCGGGCG CGGTCGACCG GGCGGCCCGT
GGCGATCGTC AGGAACAGGC GTTCGGACGG TTGGCGATCG CCGTCGCGAA GTACTGGGTG
TGCAAGCGTT CCCCGGCGCT GGCCGCCGAG GCGCTCGAAT GCCTGGGGGG CAACGGCTAC
GTGGAGGAGT CCGGGATGCC GAGGCTCTAC CGCGAGGCGC CGCTGAACGG CATCTGGGAG
GGCTCGGGCA ACGTCAACGC GCTCGACGTG CTGCGCGCGC TCACCCGGGA ACCGGCCAGC
TTCGCCGCCT TCGCCACGGA GATCGACGCG GCGCGTGGCG CGGACCGCAG GCTGGACGCG
GCCTGGGCCC GGTTGCGCGC TGTCCTGGAC CGGTCCAAGG ACGCGGAGTT CGCCGCCCGG
CGCATCGTTG AGCGACTTGC CGTCGTCCTG CAGGGCTCCT TGCTGGTGCG CTACGCCCCG
AGCGCCGTGG CCGACGCGTT CTGCGCCACG AGAGTCGCCG GTGAGGGGGG ACTGGCCTTC
GGTACCCTGC CCGATGCCGC TGATGTGCCA AATATTCTCG GCAGAATTCC ACCGATGGGC
GCCTGA
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| Protein sequence | MISPTTVNRT TAVPGTCSSR THEVTNQPPP LVGHDAAADP ALLAALAREG AGWHMDDLHR
LGRLAGSEEA ARQADEANRF PPQLRTHDRY GFRVDEVDFH PSWHALMEVA VREGLAGAPW
ADPRPGAHVA RAADILVWGT VEQGHLCPVS MTYAVVPALR AAPELAARYE PLLTSRVYDP
GLRPPEGKAG LLAGMGMTEK QGGSDVRANT TTATPAGDGT YRLRGHKWFT SAPMNDVFLV
LAQAPGGLSC FWVPRVLPDG VRNTFRIARL KDKLGNRSNA SGEPEFDDTV GWLVGEEGAG
VRAIIEMVAM TRLDSSLGSA AGMRAAVMAA AHHVRHRRAF GRPLIDAPLM RNVLADLALE
SEAATTLVLR VAGAVDRAAR GDRQEQAFGR LAIAVAKYWV CKRSPALAAE ALECLGGNGY
VEESGMPRLY REAPLNGIWE GSGNVNALDV LRALTREPAS FAAFATEIDA ARGADRRLDA
AWARLRAVLD RSKDAEFAAR RIVERLAVVL QGSLLVRYAP SAVADAFCAT RVAGEGGLAF
GTLPDAADVP NILGRIPPMG A
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