9 homologs were found in PanDaTox collection
for query gene EcSMS35_0303 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010498  EcSMS35_0303  hypothetical protein  100 
 
 
1091 aa  2207    Escherichia coli SMS-3-5  Bacteria  normal  0.0198659  decreased coverage  0.0000318594 
 
 
-
 
NC_007760  Adeh_0565  hypothetical protein  21.23 
 
 
1159 aa  119  3e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009622  Smed_6522  hypothetical protein  21.56 
 
 
1157 aa  98.6  6e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.0162687  normal  0.104781 
 
 
-
 
NC_014148  Plim_1099  hypothetical protein  20.19 
 
 
1156 aa  90.5  1e-16  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4624  hypothetical protein  26.46 
 
 
955 aa  83.2  0.00000000000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.447848  n/a   
 
 
-
 
NC_008543  Bcen2424_3739  hypothetical protein  26.46 
 
 
1140 aa  83.2  0.00000000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.203317  normal  0.0363234 
 
 
-
 
NC_011370  Rleg2_6156  hypothetical protein  21.29 
 
 
1034 aa  68.9  0.0000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0544  hypothetical protein  24.56 
 
 
1187 aa  63.9  0.00000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.503058  n/a   
 
 
-
 
NC_009665  Shew185_3242  hypothetical protein  23.33 
 
 
1107 aa  50.8  0.0001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
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