Gene Plim_1099 details

Gene Information

• Locus tag: Plim_1099
• ID: 9137785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1397355
• End bp: 1400825
• Gene Length: 3471 bp
• Protein Length: 1156 aa
• Translation table: 11
• GC content: 48%
• Product: hypothetical protein
• Protein accession: YP_003629135
• Protein GI: 296121357

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAA GTCGAACGGC AACCATACGC AGGGTTCCAG AGGGGGTGAG TCGGCGCAGT 
GTCAGGCCTT TCTCTGCACC CATTCTAGCC GGAATAAAGC CGGACACGAT TTCGCTTATC 
CTGCTCAAAG ACCAACCTGT AAGCTACGTG CGACACTTGC TTGAGTCGGT GCCGCAGTCA 
GCAGCAGGTC TTGTCGGCGA ACTTTTCCCT CAGGCTCTTA AGTCTTTGAG GCTAAAGCAC 
ACAAGCCCAT GTACCGAACT GGCAAGTGAA CTGAGGTGGC TTACCGCAAT CTTTCTTCGT 
CATAAGGAAA GGCTTGAACA ATGGGTCTCT CTCCGCACGG ACTTTGAGCG ATCAATGGTG 
TCGGGAGACT ACCCGAAAGC ACGTGTCCAG CTGTCAGAAG CCGAACTTCG TTTTGGAAAA 
TCGATTTGGG CGATTGAAAG CGAGCTTCTT CTAGCGGAAT GCTCCGAGGG CATAGAAGGA 
AATCGGATAG CACTACACCG AATCACGTCC GAGGCACCAA ATTGGATCGC AGTACTTGCA 
ACCTTTCTAA GTGAGCGCGT TGAGACAGCG CTAGCGCCGG TGGAATACGA AGCCGTCGTC 
CAGTCGCACC TGGACTTCAA TGACGACTTT CACCCCATTG CGAGAAGCGC ATTTTTTCGT 
GTTAGTCCTG CAAAACGGAA CTCTATAGCA AATCTCGAAG ATGTTTTAAA TGTCGAGGAA 
AGTCACTCGC TGTGCGATAG GCTGATAGTA AGCACACGGG TCCTGGAAAA CCTGATTTTT 
CGAGAATCGA GTGATCTAGA ACCCGGACTG TCAGACGCTA TCCAGTCGTT AGCTGACTCA 
ATAATTTGCC CGAGATTCCT CTTCCTGAAA AAGGCACTGA GAACGCGGAC GCAACTCGAT 
GCGACATCCT TGGAACAAAA AATCTTTCAA GCTGTTCACT ACTACACTCT TGGTGATTAC 
GAAAATGCAC GCTCGTTTGC GGAACAAGCG ATAGTTGATT CTCCAGAAAC CTTGGAGCCG 
TACGAGATAT TTGTAAAGTC GAGCCTTCGT TTAGGCCGTC CTCCTGTGTG CCCTTTCAGT 
CAAGATTCAA TCGCGGCCAA GATCTGTAGC AATCTGTCAA TTGTTTTCTC GCGCGAGGAC 
AAGATTAATT CTGCATTGGA AACTTTGTTG CGACTCGGCT ACCAGTTGGA TGGATTCGCA 
ATTGGCCCGC AATTAAGAGC GTTCTACGCA TTGCATTCAT ACGAGTCGAA CCCACACGTA 
CTGAGTCGCG AATGCGCAAT TTATTCTTCG GCCTTCACCC CTCGAGTCGT TGTGTCTCTC 
TACAAGGACT CGCCTAATGC GTACAGTGAA CTAGAATCAC TTGAGCAACT GCATCCCTCG 
AATGCAGCCG TATCATTATT CAAGGCAAAT CAGATAGCGA TTCGATCAAG CACGACCCAG 
CTTCAAATCG ATCTCAATAT TCCGAAAAAG CGACTGCTTC GAAACGAAGC TAATGTTTGC 
GAACAGTTGC GTTTGTATGA TGCCGCGACG CACAAATATG ATGAAGTCTT ACGCGAACGC 
GACTCTACAC TAGGGGAGAA ATCAGAAGCT GCCTCAGGCC TATATCGCTG TTTGACAGCA 
AAGAATGAGT TCTCTAAAGC TGCGAGGCTT ATCGTAGAGA CAAGCCTCGA AAGACCGCAG 
ATCATTGGAA AGTCGACGCT CATCGAATTA CTGACACAAT ATCCAGAAGG TGGTGATGAC 
GAAGTCAGTT CTGATATAGC ATGGCCGATT CTCCATTTTC TCTCGCAACA GTTAGAATAC 
GAAGAGAGAT CACCTTCAAG ACTCCACGAC GTATTCGAAG ACTTCCTAAT TGCATGTTCC 
TGCAAAAAGC CATCAGAGTT GCTAAAGATC TCGAGCCAGT TTAACAATCG AGAGTTCTCG 
TTCTTCCTTC GAAACGTGTG CGCTTTCGAA GTCCTCGCAG AATCGTTTTG GTTCGAATCC 
CAAGACGAAA TTGCTCTCGA GCGAATTTCC CTTTGTGAAT GGCTTATTGA GAACGACCCG 
GAGAACCGGC GAATCGACCA GGCGGAGATT GCTGAGATCA GCAGGATTCT CGCTATTCGT 
GAATTAACAC ATCATGCTGA GCGGTCAAGA ATCTTCGTGG ATACGGATGC AATCATCGAG 
TCTCTTCCAA AGACAATTCT TGACCGAGCG ACTCGGTGCA TGACGCTCGG CATGCTCAAA 
GACGTCAGTC TCCGTCAAAC TATAGAGATT ACAAAAGCTC TAATGGAGGA AATTGACAAT 
AGCAGGATCT TCATCATTGA CGAAGGGTTT CGGCTTTTCA AACAAGTATT TGAGGACCTG 
AAGACACAAT TTTTATCCAG CAATAAGTAC GGTCTAGACG CTAATCTGAG CCAGCGAATC 
CGCCATGGAA CGCTAGCTGG GGCTCTCCGC GCGCCGTTCG AATCGCAACA ACTTGTCACG 
CTTAAAGACA GCTCAGGAAG TTATATGCAA AACGATTTCT GGATAAGGCG AGTTTGTCGC 
AGTGAGCATG ATTCGACTGG CCTAAGCGAA GCCTTGGCAG AGTTTTCGGC GACCGTTGAT 
GGCATTATCT ATCGAGTCAG GAATGAATGG GTTCAAATCC GACAGAGCTC GGGATCAAGT 
AGCGCACTTT TCAATTTCGA GTTCACAGAA GACCAGCTCG TTTGCTTGTA CGAAGCCACG 
CTTAGCGCGG AATCGCCAGC CGACATGGTT CGGAAAGTAT TTGAAGCGTT ATGGCAACGC 
ACTGACGAAG CCCTAAAGGA GGTTAGAGCA ACTATAGAAA ATGCTCTTTC ATCTGAACTC 
TTTGAGGCAA TGAAGCGTTG CGAGCAGCGA ATCGATTCAG TGATTGGGCA TGATCAATCA 
ATGCCTATTC GTGCTGCTTT CACAACTTGT GGAACGCATT TGACCATGGC GCTGAAAGCA 
ATTTCGGAAT GGTTTAGACT CGATGAGCAG AAGCATGTGC CTGACTGTCA GTTGCGCTCT 
CTATTAGAGG CTAGCACGGA AGCGGCGAAG CAATTTTGTG GGCCTTCGCG ATTGGAGATA 
AACGTCATTT TGGATAACGA CGTTACTGTA CCCGGCAACC AATTCCGTGC TTTATGGGAC 
ATGCTTTTCA TACTTCTTGA TAATGCGGCG AAACACTCAG AATCGACGCA GACGAATGTG 
ACAATCGAGG TTGTTGCCAA TGGGCCGGTT ATTAAGATGG TCTGCAAGAA CGAATTGCCG 
AGCAACATCG ACGTAGAGCT TCTGAAGGAG AAAGCGGCGA GACTAAATCA GATGACCGCA 
GACGAGCATT CGCTCGCGAC TTCACGCGTC GAAGGCGGGA GCGGATACGG CAAGCTACAC 
AAGATTTTGT GCTATGAGAT GGGACTAGAC AATTATCGAG TCTTTGTTAG TGCTGATTCA 
AATGAATTTC AGGCAGTCAT TGAGCTCGAG GTACCATGGA GACGGCAATG A 

 

Protein sequence

MGKSRTATIR RVPEGVSRRS VRPFSAPILA GIKPDTISLI LLKDQPVSYV RHLLESVPQS 
AAGLVGELFP QALKSLRLKH TSPCTELASE LRWLTAIFLR HKERLEQWVS LRTDFERSMV 
SGDYPKARVQ LSEAELRFGK SIWAIESELL LAECSEGIEG NRIALHRITS EAPNWIAVLA 
TFLSERVETA LAPVEYEAVV QSHLDFNDDF HPIARSAFFR VSPAKRNSIA NLEDVLNVEE 
SHSLCDRLIV STRVLENLIF RESSDLEPGL SDAIQSLADS IICPRFLFLK KALRTRTQLD 
ATSLEQKIFQ AVHYYTLGDY ENARSFAEQA IVDSPETLEP YEIFVKSSLR LGRPPVCPFS 
QDSIAAKICS NLSIVFSRED KINSALETLL RLGYQLDGFA IGPQLRAFYA LHSYESNPHV 
LSRECAIYSS AFTPRVVVSL YKDSPNAYSE LESLEQLHPS NAAVSLFKAN QIAIRSSTTQ 
LQIDLNIPKK RLLRNEANVC EQLRLYDAAT HKYDEVLRER DSTLGEKSEA ASGLYRCLTA 
KNEFSKAARL IVETSLERPQ IIGKSTLIEL LTQYPEGGDD EVSSDIAWPI LHFLSQQLEY 
EERSPSRLHD VFEDFLIACS CKKPSELLKI SSQFNNREFS FFLRNVCAFE VLAESFWFES 
QDEIALERIS LCEWLIENDP ENRRIDQAEI AEISRILAIR ELTHHAERSR IFVDTDAIIE 
SLPKTILDRA TRCMTLGMLK DVSLRQTIEI TKALMEEIDN SRIFIIDEGF RLFKQVFEDL 
KTQFLSSNKY GLDANLSQRI RHGTLAGALR APFESQQLVT LKDSSGSYMQ NDFWIRRVCR 
SEHDSTGLSE ALAEFSATVD GIIYRVRNEW VQIRQSSGSS SALFNFEFTE DQLVCLYEAT 
LSAESPADMV RKVFEALWQR TDEALKEVRA TIENALSSEL FEAMKRCEQR IDSVIGHDQS 
MPIRAAFTTC GTHLTMALKA ISEWFRLDEQ KHVPDCQLRS LLEASTEAAK QFCGPSRLEI 
NVILDNDVTV PGNQFRALWD MLFILLDNAA KHSESTQTNV TIEVVANGPV IKMVCKNELP 
SNIDVELLKE KAARLNQMTA DEHSLATSRV EGGSGYGKLH KILCYEMGLD NYRVFVSADS 
NEFQAVIELE VPWRRQ