| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0544 |
|---|
| Symbol | |
|---|
| ID | 3784727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 627117 |
|---|
| End bp | 630680 |
|---|
| Gene Length | 3564 bp |
|---|
| Protein Length | 1187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637810626 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_411244 |
|---|
| Protein GI | 82701678 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.503058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGCT CAAAGCGGAT TAGAAATCCA AAAAAGATAA GAAATAAGCA ATCAGCTAGA
CAAGACAGAA TTATTGGCGA GATCGCGAGT GCTATCCGTA TGCGAGGGCA TTTAGAAATC
GCAAAGCTAA AAATACAAAC ATCTGTAGAT GAGCTCTTCA CCTTCTTTCC AAGAATTTTT
CGCCAAAAAA ACGCTCTAGA TTTCGTTCAC GGTCCCGCGT TTCCAGTTAA ACCCTCAGAG
CTATTTTCTA AGCCAGCGCT ATATCAACCC GCTGGGCCGT TTAACGAGCT TATTTGGGGC
GTTTGCCGCT GCCTTCAATT TAGTGAGGAA TTGAAAGACT TCACACATCT CCGCGAAGAA
TATGAGCGCT CCCTTCTCCG AAACTCAAAG AGCAAATGCA ATGAAATTCT TAATGTTATT
GAGAGAAAAT TTGGATGTTC AATCTGGCTC ATACAAAACA AGATTGCTGC GGCACAATTC
TGGGAGGGTA TTGAAGAAGC CAGGAAACTA GGGCAGCTGT ATGAGGACGA GTGCAAGGAC
CATCAGCTGA TGCCTTGGAT TATACGTTTT ATTGGAAAAC GAATTGAAGC AACGGGACTT
AAAGGTTATC TAAAGACCGA GCTGTTAAGG ATGTTTGGGG ACTACAGCAA TCCAATACTT
CAAAGCTATT TGAGAGCGAA ACTATTTGAG CTATCTCATA TACATACTGA TGATGTACCT
GCCACTCTAT ACGTGGAAGC CCAGTCCTGT GTTATCGATC ACTACGAAAC CTTGGTATTT
ATCCTTCAAT CAGCGGCTCG AACTCGAGCA ATTTCAACCG GAATGATACC GGTAATTGAA
AAGCCACTAG TCGCTATCTT TAGAAGGACG CAGGACATTC GTCTGGCAGG CGTACTTAGG
GGGCTAGATA TCGTGCCTAG TACTGTTACT GTCTATAACA AGCAAAGGGC AGAGTTAATA
GAATTATATA CAAAAGGCGA ATACCCACTC ATGGCGCAAA ATTCGGAGAC ATATCTACGT
GACTTCCCGG AGGATATGTC CATACAAGTT ATGAGATTGA AGGCCTGCTT GCAAGCTGGG
ATTTCCTACC CCGACCAACA AGGAGTTCTT AAGGAAGCAT TTAGAAGCTT ACACGAGGTG
CTCAGTCTAT CTACGAATAC CTACTCCGCG GCCTTTGCAC TCATTACTTT ATCCGAACGC
TTCTATGGAC ACTCTTGGGT TCACTATCTT GAGGCTGTAA CTCGATATGA ACTACGTCCG
GAACAAGCTG CATTCCCACC CGATCCACTT AGGGATATCT TTATAAGGGA ACCTCACGTA
ACGCCTTTTA GTGCTGTGGC GGCAAATGGT CAAGCCAAAA TTAAAATTCT TAACGATGAG
CAGTTAAAAA TATTATTTCC CTATACGCGC GCCGTGTATG ACCTGGTAAG TAGCGGGCAG
ATCGACGAAC CCCTGCCGAT AAGCGAGATA AGAAAGCAGA AATACCTAGC GGTTTATCAT
CTGGCTTTTG GTAGCCCCAT ACGAGCTGCA GAACATTTCC AGTGGTTAAT TGTGAACACA
ACCGGCGTCG AAAATATTCG AGCCCGAGGG GGAGCGGCAC TTGCACTCTT GAAATTAGAT
CGCATCTCAG AAGCAGTCGA TACAACGGTT GCAGCATATA TTGAGAATCA GAATGTGCCG
ACCTTATTGC CTATCAAACA GGTTGCTGAT GCACTCAAAG AACCCGCAGA TTGGCCAAGA
TCAATATCGA CATCATTATT GTTCCAACTC TACACGTTGT ACTGCGGACC GGAAAAGATT
GCGCAGTTAC GATATTCGTT TGAACTATTC CAAGTAAATA ATCGGATAAA TGAACCATCA
GACCTTGCGG AAAGAATCGA AGAGTTCGGG AAGCCTTTTG TTATAGCCTA TCTCAGAAAC
ATTTGGACAC CAGAAATTAT GAGACATACT ATTCTTTATT CTGGAACAAG AGAGATTGAA
GAGGCTCGAA TTAAAGTTTG CCGCATACTT GCCGAATTAG ATCCGGAAGG TGAGGTAGTT
TACTTCGATG AAATCAAAGA GCGTGTAAAA CAGCAGGAAA TAGCGAAGGG GACTAGGCTC
ATTGAGCAGA GCAAAGTTTA TGTAGAAATC GAAGCAATAA AAAAATCACT GAAGACGAAA
CTTGAAGATT CATACATTCG TTATAAAAGC TCATCTCAAA CGTCAGTATT AAAACCAGAA
CAATCATTTG CTAAAAATTT CATCACTAAT TTAGGTGCGG TTTTCGCCAA GGAGAACTCG
ATCTCCGTCC CTTTAGCCCT ATCGAAGATA CAAACACTTA ATCTCAATCT CGATATGGGC
TCCGAGTCCG ACGTACAATT CGAAGCCCTA TTTTCGGAAG TCACAAATGA ATTTTTACGT
GGGGACCATG GGCTTAACGC ATACCTCAGC ACTACAATTA GACACGGAAC ATTAAGTAAT
ACTCTCCGTA AACCAGTTGC AGATGAGCGA CTCATAACCT CACGGGAAGA AGGGAGCAAA
TCCTATATAC GTAACCAATA TTGGGGTCAC GGAGAGAAGG GCTATAGTGA ATATCAGGCT
GAGTGGCAGC TAATTTTAGA TGCACTAGAT ACTTTCTCAA GCGAGTTCGA TAGTGTTATT
GAGTATCTTA AAGATGAACT TATTCAGATC AGAATAGTTC ACGAACTCAA GGATTCGGGC
GAGAACAAGA ACGCGCTATT TGTTTATCGC TCATCGCAAT GGGAAAGAAA ATTCGTCCAA
GAGCAGGATA AAGCTTTTAC AAATATGGAT GAATTCGTAA ATTATTACGT AGACATTCTC
TGGGAAAAAA CTGATCTAAA TTTGCGTAAT GTTCAATACG TGTTAGATAC GGACATACGA
GCCCGCCTGA TGGAGCCTTT CGTTAAATTA ACAAATCATC TAAATCGTGT CCCTGCCCCA
GGTATTAACG ACTTATTAAA CGCTGTAGGA AGAGCAAAAA CGAACGTTCA AAATCAGCTA
GGTCTAGTTA TTTCTTGGTT TAAAAGGAGC GAAGTATATG ACCGACAGGA CTGTGCTGCC
GATTTTCCCT TTCACATTGC CCTCAATATG GTAAAAAACA CCATGTTCAA CGCAACTGGT
TGGAATGGTG CCTCAGTCTC TCTCTCACGA GACACCCCTT TAATGCCAGG TCGCACTTTG
GACGGAATGG TGTATGTATT TCATGTTCTT CTTGAAAACG CTGTGCTGAG GTCGGGATTG
GAGATGGATG AATTGACTGT AAAAGCAGAG CTTTCTTTTT CTAATGGCGT TTTCAATGCG
AGAATATCTA ATAATCTCGC TCCTGCGAAA GTTACTCAGG CGGAACGCGA CAAACTCAGC
AAGCTCCGTG ATTCGCTTAG AAGTGATGAG TCTCCACGCC GTGCCCAGCG TGAAGGCCGA
AGTGGTTTAC ATAAGATATG GCGTACGATT AATTCACCGA TATACAAAGA GCCGAAGCTT
GATTTCTATC ACTTGGAAGA CTCATTTGTA GTCGAGGTGA ATTTCAAACT TGAGAAGAAA
GACCATGAAT ATCTTGGTCA TTGA
|
|---|
| Protein sequence | MASSKRIRNP KKIRNKQSAR QDRIIGEIAS AIRMRGHLEI AKLKIQTSVD ELFTFFPRIF
RQKNALDFVH GPAFPVKPSE LFSKPALYQP AGPFNELIWG VCRCLQFSEE LKDFTHLREE
YERSLLRNSK SKCNEILNVI ERKFGCSIWL IQNKIAAAQF WEGIEEARKL GQLYEDECKD
HQLMPWIIRF IGKRIEATGL KGYLKTELLR MFGDYSNPIL QSYLRAKLFE LSHIHTDDVP
ATLYVEAQSC VIDHYETLVF ILQSAARTRA ISTGMIPVIE KPLVAIFRRT QDIRLAGVLR
GLDIVPSTVT VYNKQRAELI ELYTKGEYPL MAQNSETYLR DFPEDMSIQV MRLKACLQAG
ISYPDQQGVL KEAFRSLHEV LSLSTNTYSA AFALITLSER FYGHSWVHYL EAVTRYELRP
EQAAFPPDPL RDIFIREPHV TPFSAVAANG QAKIKILNDE QLKILFPYTR AVYDLVSSGQ
IDEPLPISEI RKQKYLAVYH LAFGSPIRAA EHFQWLIVNT TGVENIRARG GAALALLKLD
RISEAVDTTV AAYIENQNVP TLLPIKQVAD ALKEPADWPR SISTSLLFQL YTLYCGPEKI
AQLRYSFELF QVNNRINEPS DLAERIEEFG KPFVIAYLRN IWTPEIMRHT ILYSGTREIE
EARIKVCRIL AELDPEGEVV YFDEIKERVK QQEIAKGTRL IEQSKVYVEI EAIKKSLKTK
LEDSYIRYKS SSQTSVLKPE QSFAKNFITN LGAVFAKENS ISVPLALSKI QTLNLNLDMG
SESDVQFEAL FSEVTNEFLR GDHGLNAYLS TTIRHGTLSN TLRKPVADER LITSREEGSK
SYIRNQYWGH GEKGYSEYQA EWQLILDALD TFSSEFDSVI EYLKDELIQI RIVHELKDSG
ENKNALFVYR SSQWERKFVQ EQDKAFTNMD EFVNYYVDIL WEKTDLNLRN VQYVLDTDIR
ARLMEPFVKL TNHLNRVPAP GINDLLNAVG RAKTNVQNQL GLVISWFKRS EVYDRQDCAA
DFPFHIALNM VKNTMFNATG WNGASVSLSR DTPLMPGRTL DGMVYVFHVL LENAVLRSGL
EMDELTVKAE LSFSNGVFNA RISNNLAPAK VTQAERDKLS KLRDSLRSDE SPRRAQREGR
SGLHKIWRTI NSPIYKEPKL DFYHLEDSFV VEVNFKLEKK DHEYLGH
|
|---|
| |