7 homologs were found in PanDaTox collection
for query gene Dd1591_1890 on replicon NC_012912
Organism: Dickeya zeae Ech1591



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012912  Dd1591_1890  type III secretion apparatus protein, YscD/HrpQ family  100 
 
 		 323 aa  655    Dickeya zeae Ech1591  Bacteria  normal  0.925496  n/a   
 
 
-
 
NC_012917  PC1_2207  type III secretion apparatus protein, YscD/HrpQ family  58.51 
 
 		 309 aa  367  1e-100  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_1401  type III secretion protein HrpQ  32.96 
 
 		 330 aa  178  1e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1214  type III secretion protein HrpQ  30.75 
 
 		 324 aa  163  3e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.35063  normal  0.65254 
 
 
-
 
NC_009439  Pmen_0040  YscD/HrpQ family type III secretion apparatus protein  32.13 
 
 		 304 aa  163  4.0000000000000004e-39  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008741  Dvul_2996  YscD/HrpQ family type III secretion apparatus protein  30.77 
 
 		 598 aa  47.4  0.0004  Desulfovibrio vulgaris DP4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_42340  type III export protein PscD  30.08 
 
 		 432 aa  46.6  0.0005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>