| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1890 |
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| Symbol | |
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| ID | 8119367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2157664 |
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| End bp | 2158635 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644852281 |
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| Product | type III secretion apparatus protein, YscD/HrpQ family |
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| Protein accession | YP_003004219 |
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| Protein GI | 251789498 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02500] type III secretion apparatus protein, YscD/HrpQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.925496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAC TACGTGTTCT GACCGGATTA CACCGAGGGG CCGCGTTGCC GCTGAGCGGA
ACCTCATGGC GTATCGGCTC TTCCGACGAA GCCGACATGG TGCTCTACGA TCCCGGCATC
CGCGAGCAAC ATTGCTTGCT GGAAAAATTA ACCACGGGCT GGCAGATAGC CGTACTGGAC
GGCCCGGTCA TCAATAGCGA AGGCCACGCC GTGGAGCAAT CGCTGATGCT ATCGCCCGGC
ACGCCCTTTG CCGTCGGCGG CATCTGGCTG TGCGTGGTCA GCGCCGATAC GCCCTGGCAG
GATGAGGCGG AAGAAACGCC GCCGGATGAA CAACAACACG TCGGCGACGC CGAAACGCCT
GCGGACGCGC CGCCGACCGA AGCCGTTGCC CCCGAGGAAA CGTCCCCGAC GCCGACGCCG
GAAACCCTGT TGGTGTTGCA GGAAAAACGC CGTCTGCCGC TGTGGGCAAA ATTCAGCTAC
CTGCTGCTGG CCGTGCTGCT GTTCATGATC ATCGGCAGTT GGATGTTGCA GGAAACGGCG
GCGATGCCGC CGGCACCGCC GGCGCAGGAT ACCCGTTTAC CGATCGGTAC GTTGCCGCAG
CTCACCAGCA CCCTGCAAAC CATGCTTACC GACCGCGAGC TGGAGCGGCT GGTCACCACC
AGCCTGGATA ACAACCGCAT CGTGCTGAGC GGCGCGCTGC TGCCGGCGCA ACACACCCGG
CTGGCACGTA TGCTGGCGCA ATTTCACCAG CGCTACGTCA CCGCATTGCA GATTGAAAAC
CTCACCACGG TGAAAAACGA CCAGTTGCCG TTCCAGATAG TACAAGTCAC CAGCGGCCCG
AAAGCGAATG TCGTCACCTC CGACGGCCGT CGTATCTTCG TCGGCGATGA GGTGGACAAC
CTGCGGCTGG TCAGCATCAA CGACAGCCAG ATCGAATTTC GCGGCAAACA ACAGATCAAG
GTGAACTGGT AA
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| Protein sequence | MFELRVLTGL HRGAALPLSG TSWRIGSSDE ADMVLYDPGI REQHCLLEKL TTGWQIAVLD
GPVINSEGHA VEQSLMLSPG TPFAVGGIWL CVVSADTPWQ DEAEETPPDE QQHVGDAETP
ADAPPTEAVA PEETSPTPTP ETLLVLQEKR RLPLWAKFSY LLLAVLLFMI IGSWMLQETA
AMPPAPPAQD TRLPIGTLPQ LTSTLQTMLT DRELERLVTT SLDNNRIVLS GALLPAQHTR
LARMLAQFHQ RYVTALQIEN LTTVKNDQLP FQIVQVTSGP KANVVTSDGR RIFVGDEVDN
LRLVSINDSQ IEFRGKQQIK VNW
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