22 homologs were found in PanDaTox collection
for query gene Daro_0890 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_0890  hypothetical protein  100 
 
 
216 aa  427  1e-119  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.420603 
 
 
-
 
NC_008740  Maqu_0750  fimbrial assembly family protein  32.45 
 
 
205 aa  82.8  0.000000000000004  Marinobacter aquaeolei VT8  Bacteria  normal  0.151549  n/a   
 
 
-
 
NC_008228  Patl_0167  hypothetical protein  27.93 
 
 
203 aa  80.1  0.00000000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3093  fimbrial assembly family protein  29.6 
 
 
214 aa  76.6  0.0000000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007404  Tbd_0761  hypothetical protein  30.46 
 
 
215 aa  62.4  0.000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0217944  normal  0.367584 
 
 
-
 
NC_011138  MADE_00248  putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (pilus type IV)  22.75 
 
 
208 aa  61.2  0.00000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1132  methionine sulfoxide reductase B  22.91 
 
 
202 aa  58.2  0.00000009  Saccharophagus degradans 2-40  Bacteria  normal  0.419096  normal 
 
 
-
 
NC_011901  Tgr7_3277  MshA biogenesis protein MshI-2  25.74 
 
 
216 aa  49.7  0.00003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0466  type IV pilus, mannose-sensitive hemagglutinin D (MSHI)  22.95 
 
 
487 aa  48.5  0.00007  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0327432  n/a   
 
 
-
 
NC_013456  VEA_002365  MSHA biogenesis protein MshI  22.16 
 
 
481 aa  48.5  0.00008  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3335  fimbrial assembly  24.86 
 
 
229 aa  45.1  0.0007  Rhodoferax ferrireducens T118  Bacteria  normal  0.345488  n/a   
 
 
-
 
NC_009457  VC0395_A2817  MSHA biogenesis protein MshI  21.26 
 
 
479 aa  44.7  0.001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0541  fimbrial assembly family protein  23.08 
 
 
203 aa  43.9  0.002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0502  hypothetical protein  25.5 
 
 
200 aa  43.1  0.003  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4420  fimbrial assembly family protein  20.67 
 
 
200 aa  43.1  0.003  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3838  hypothetical protein  25.5 
 
 
200 aa  43.1  0.003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0505  hypothetical protein  25.5 
 
 
200 aa  43.1  0.003  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0481  hypothetical protein  24.02 
 
 
200 aa  42.7  0.004  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3771  fimbrial assembly family protein  24.43 
 
 
202 aa  42  0.007  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0386  fimbrial assembly family protein  25.38 
 
 
201 aa  42  0.007  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0451  hypothetical protein  22.61 
 
 
200 aa  42  0.007  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0382  MshA biogenesis protein MshI-2  27.81 
 
 
201 aa  41.6  0.008  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>