| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002365 |
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| Symbol | |
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| ID | 8556060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 834403 |
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| End bp | 835848 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646405423 |
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| Product | MSHA biogenesis protein MshI |
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| Protein accession | YP_003284992 |
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| Protein GI | 262393138 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCA AAGCACTACT CGACAAGCTC AAACGATCAT CTGGTGGTGG TCGTTCCTGC
TTTTTGGTTA TTCAGCCAGA CGCCGTTTAT TTATCATCTT CAATAAAAAG TGGCCGCCCA
TACCAATTTG ATATTTCTGA ATCCAATTGG GAGAAAGCCG TAGAGCAAGC ATTGAGCGTT
GCTGCTAGTG CGTATGATTC TCTAACGGTT GTCCTTTCTC ATAACTATTA TCAGATGTAT
CAAATTGACA AACCTGTCAT GCCGCGCCAA GAATGGCCTG CAGCATTACC GTTTTTGTTG
AAAGAACTGA TCTCTGAGCG TGCCGTCGAC ATCATTGCCG ATGCGGTAGA GCTACCCAAT
TCAACCAAAG TGCAAGCTTA CGTCTTATCA CGAAAAATGT TGGATAAGAT CGTGTTACTG
GCCAGTCGCG CCCAGTTGCC ATTAGAAGCT ATTCTTCCTG AAGACGACAT TTGGGGAGAG
ACCGCAGGTG AACTAGGTAA CTTCCTATTA TTACAACGCA GTGTGCGTGG TCACTTCCGT
ATTAGCGCTT TTGTCGAACA TACTATCGCG TTCCATCGTT CGATTCGCAG TGTGACGCCA
CCGTTAACGG GTGTTCCGTC TAGCGAGTTA CAGATGGATA GCCTCTCGTT AGAACTGCAA
CGTTCGATTG ATTATCTTTC TTCTCAGTTG CGCCATGTGC AGCTGCATCA ATTGAAAGTG
TGTTGTGATG AGGAGGATGA GAGTGAGCTT GTTCAGTCTC TGAACTATCG TTTAAGCACT
AAAGTTTCTC CGTTATTACT ACCAGAACAT GAGTTATCAG GACACGTTTT AGCAGATGCT
GCTGCGGCTT CTAATACTCG ACGCGTTAAC TTATACCCTG ATTACTTAAA GCCGAAAAAA
GAGCTCCTGA CACTAAAAAA TATCGCGTTA TCTTGGGGTG TCGCGGCTGC GGCCATTCTA
CTCTCTTACG GCTATGTGAC TTGGCAGAGC AGCGGTTTAG AAGATGAAAT TGCTATTGTA
AAAAGCAAAG GCGATATCAT GAATTCAGAG CTTGAACGCT ATCAAGTCAA GCTACGTAAA
CATCAACCCG ACAATAATAA GCTGGCAGCT AAAGCCCGCT TAGAGCGTGA AGTCAAGGCG
AAGCGAGACT CGCTTAAAGC CGTCGGGAAA TACGATGACT CGCAGCGCAC GGGTTACTCT
GGCGTTATGC AATCATTAGC TAAGCTAGGA AACCAAGAAA TTTCTTTGTC CGAAATTCGA
ATCAATAACC ATACCTTAGA TCTGAAGGGA CTGGCGAAAA AGCCGAGCTC AGTACCAAGT
TGGGTTAACC AATTTAAAAA TGAAATTAGC TTGGTTGGCC GGACATTTGA CGACGTCAAA
ATTGGCCGAA ATGATAAGGA TATTGTGACG TTTGAACTAA AAACGCGCGA GGATAAAGAG
AAATGA
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| Protein sequence | MDFKALLDKL KRSSGGGRSC FLVIQPDAVY LSSSIKSGRP YQFDISESNW EKAVEQALSV
AASAYDSLTV VLSHNYYQMY QIDKPVMPRQ EWPAALPFLL KELISERAVD IIADAVELPN
STKVQAYVLS RKMLDKIVLL ASRAQLPLEA ILPEDDIWGE TAGELGNFLL LQRSVRGHFR
ISAFVEHTIA FHRSIRSVTP PLTGVPSSEL QMDSLSLELQ RSIDYLSSQL RHVQLHQLKV
CCDEEDESEL VQSLNYRLST KVSPLLLPEH ELSGHVLADA AAASNTRRVN LYPDYLKPKK
ELLTLKNIAL SWGVAAAAIL LSYGYVTWQS SGLEDEIAIV KSKGDIMNSE LERYQVKLRK
HQPDNNKLAA KARLEREVKA KRDSLKAVGK YDDSQRTGYS GVMQSLAKLG NQEISLSEIR
INNHTLDLKG LAKKPSSVPS WVNQFKNEIS LVGRTFDDVK IGRNDKDIVT FELKTREDKE
K
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